Pairwise Alignments

Query, 388 a.a., cation:proton antiporter from Methanococcus maripaludis S2

Subject, 741 a.a., cation/H+ antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  125 bits (315), Expect = 3e-33
 Identities = 107/407 (26%), Positives = 195/407 (47%), Gaps = 32/407 (7%)

Query: 3   ISWVLFTVGVCLIFGKIGNEIMWRFGFPSVFGEILIGIIFGNL---LFFGIVDSSHLTLH 59
           ++ +L  +   L+  ++   +    G P V GEI+ GI+ G     LFF         +H
Sbjct: 64  LTTLLIQIIAVLLMVRLFGYLFSLIGQPGVIGEIVAGIVLGPSVLGLFFPEAFHFLFPVH 123

Query: 60  ENDIFDFLSTVGIMFLLFISGLEIDIHRLKKTENISIVAAVLGAVFPLIFGYISLSYFGY 119
                + LS VG++  +F+ G+E+D   LK   N ++V +  G + P   G +S SY+ Y
Sbjct: 124 SLTNLELLSQVGLILFMFVIGMELDFSVLKNKINETLVISHAGILVPFFLGILS-SYWIY 182

Query: 120 TAKES---------IVGGVILTATSIGITARLLMDLKVLKTDVGAAAISASILDDFLGLI 170
               +         +  G+ ++ T+  + AR++ +  + KT +G  AI+++  DD     
Sbjct: 183 ETYAADHTPFLPFALFIGISMSITAFPVLARIIQERNMTKTPLGTLAIASAANDDVTAWC 242

Query: 171 LLILAVG---SGSL------LGL-ISEITVFFIITGYFGWKLIKKYLIFAEKFHIEKTVL 220
           LL + +    +GS       +GL ++ I V F++   F   L K   ++A K  I KT +
Sbjct: 243 LLAVVIAISKAGSFASALYSVGLAVAYIAVMFLVVRPF---LKKVGEVYANKEAINKTFV 299

Query: 221 SFTIALMFLFSFLSESWFEVAIEGAFMAGLIL-SKTSEGKTLAKEIKSIGNSFLIPLFFI 279
           +F + ++ + S L+E     A+ GAFMAG+++ S     K + ++++ I   F +PLFF 
Sbjct: 300 AFILLILIISSCLTEIIGIHALFGAFMAGVVMPSNLGFRKVMMEKVEDISLVFFLPLFFA 359

Query: 280 YTGARLNLTAFLNHEALILATIFIIVGVFTKFVGWGLGAKIMGKWDLKKSIQLASASVPR 339
           +TG R  +    + E  ++  + + V +  K  G  + A+++G+   K S+ + +    R
Sbjct: 360 FTGLRTEIGLINSPELWMVCLLLVTVAIVGKLGGCAIAARLVGE-SWKDSLTVGTLMNTR 418

Query: 340 AEIALINLMIAVSAGVILEENISKFIAATLIFVTFSIVITPPLLKKV 386
             + L+ L I    GV L  +I   +    +  TF   +T PLL  V
Sbjct: 419 GLMELVALNIGYEMGV-LPPSIFVILVIMALVTTF---MTTPLLHLV 461