Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 519 a.a., nitrogenase molybdenum-iron protein beta chain from Azospirillum brasilense Sp245

 Score =  281 bits (720), Expect = 3e-80
 Identities = 169/464 (36%), Positives = 256/464 (55%), Gaps = 26/464 (5%)

Query: 3   EKKFA----VINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNV 58
           EK FA    VINP K CQP+GA+FA  G + ++P +HGS GC  Y R  L RHFKE  + 
Sbjct: 58  EKNFAREAVVINPTKACQPIGAMFAAQGFEGTLPFVHGSQGCVAYYRTHLTRHFKEPNSA 117

Query: 59  ASSSMSEANAVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQN 118
            SSSM+E  AV GG  N+   + N   +Y P++I V T+C++E IGDD+ G I   K + 
Sbjct: 118 VSSSMTEDAAVFGGLNNMIDGLANAYALYKPKMIAVLTTCMAEVIGDDLSGFINNAKNK- 176

Query: 119 DDLPEIVPI---STPSYKHTHVEGYDSTVKALV-------ENLATPSKPNSKLNVITGM- 167
           + +P   P+    TP++  +H+ GYD+ +K ++       EN  TP   N K+N+I G  
Sbjct: 177 ESVPADFPVPFAHTPAFVGSHIVGYDNMIKGVLTHFWGTSENFDTPK--NEKINLIPGFD 234

Query: 168 -VSPGDIAETKRILREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFA 226
             + G+  E KRI    GI+  IL+D S++ D P DGE   +   GT +E  K+  ++ A
Sbjct: 235 GFAVGNNRELKRIAGLFGIDLTILSDVSDNFDTPADGEYR-MYDGGTPLEATKEAVHAKA 293

Query: 227 TISLCKHANSAAKFLHEAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGK 286
           TIS+ ++    +    +  G        P+G+  TDE + +L +L+ K +P ++  ERG+
Sbjct: 294 TISMQEYCTPQSLQFIKEKGQQVAKYNYPMGVTGTDELLLKLAELSGKPVPAELKLERGR 353

Query: 287 LIDAMIDAHQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVT 346
           L+DA+ D+H H  G++ A+YGDPD  +G ++F++ELG  P  + + S SK + + ++ V 
Sbjct: 354 LVDAIADSHTHLHGKRFAVYGDPDFCLGMSKFLMELGAEPVHILSTSGSKKWEKQVQKVL 413

Query: 347 KDSKHKPVILAPG--DLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRV 404
             S       A G  DL+ L   +   KVD +IGNSYG  +     IPLIR+ +PI+DR 
Sbjct: 414 DASPFGKSGKAYGGKDLWHLRSLLFTDKVDYIIGNSYGKYLERDTKIPLIRLTYPIFDRH 473

Query: 405 GAQRITSLGYTAGIRLVDTITNTILDRYFDEFGWALNENTEVDH 448
              R  + GY   +     +   ILDR F++     N   E D+
Sbjct: 474 HHHRYPTWGYQGAL----NVLVRILDRIFEDMDANTNIVGETDY 513