Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 513 a.a., NifK nitrogenase molybdenum-iron protein beta chain from Sinorhizobium meliloti 1021

 Score =  290 bits (741), Expect = 1e-82
 Identities = 163/433 (37%), Positives = 249/433 (57%), Gaps = 10/433 (2%)

Query: 8   VINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASSSMSEAN 67
           V+NP K CQP+GA+FA  G + +M  +HGS GC  Y R  L RHFKE  +  SSSM+E  
Sbjct: 63  VVNPAKACQPLGAVFAAAGFERTMSFVHGSQGCVAYYRSHLSRHFKEPSSAVSSSMTEDA 122

Query: 68  AVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEI-VP 126
           AV GG +N+   + N  K+Y P++I V+T+C++E IGDD+ G I   K +     +  VP
Sbjct: 123 AVFGGLKNMVDGLANTYKLYDPKMIAVSTTCMAEVIGDDLHGFIENAKDEGAVPHDFDVP 182

Query: 127 IS-TPSYKHTHVEGYDSTVKALVENLATPSKPN---SKLNVITGM--VSPGDIAETKRIL 180
            + TP++  +HV+GYDS VK ++EN     +       +N+I G      G+  E KR+L
Sbjct: 183 FAHTPAFVGSHVDGYDSMVKGVLENFWKGEQRTVNPGSINIIPGFDGFCVGNNRELKRLL 242

Query: 181 REMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHANSAAKF 240
             MG+    + D S+  D P DGE   +   GT +E+++   N+ AT+SL ++       
Sbjct: 243 NLMGVSYTFIQDASDQFDTPSDGEFR-MYDGGTKIEDVRAALNAEATVSLQQYNTRRTLE 301

Query: 241 LHEAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGKLIDAMIDAHQHNFG 300
             +A G ++VS + P+G+++TDEF+ ++ +++ +EIPE I  ERG+L+DAM D+     G
Sbjct: 302 YCKAAGQSTVSFHYPLGVKATDEFLVKVSEISGREIPEAIRLERGRLVDAMADSQSWLHG 361

Query: 301 RKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVTKDSK--HKPVILAP 358
           +K AIYGDPD V    RF++E G  P+     + +  +  ++K +   S   +   + A 
Sbjct: 362 KKYAIYGDPDFVYAVARFIMETGGEPTHCLATNGTPAWEAEMKMLLASSPLGNDAQVWAS 421

Query: 359 GDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRVGAQRITSLGYTAGI 418
            DL+ +   +    VDLLIGNSYG  +      PLIR+ FPI+DR    R   +GY  G+
Sbjct: 422 KDLWAMRSLLFTEPVDLLIGNSYGKYLERDTGTPLIRLMFPIFDRHHHHRFPLMGYQGGL 481

Query: 419 RLVDTITNTILDR 431
           R++ TI + I DR
Sbjct: 482 RVLTTILDKIFDR 494