Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 415 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 104/413 (25%), Positives = 173/413 (41%), Gaps = 53/413 (12%)

Query: 8   VINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASSSMSEAN 67
           ++ P   C   GA++A   +    PL+H + GC        G      V+  +S++SE +
Sbjct: 5   LMRPRAGCALHGALYAATAIDGVTPLVHATPGCGVQAGLWQGVGGC-GVSWPTSNLSEKH 63

Query: 68  AVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIVPI 127
            V GG   L+  I+N   +   EI  V T C +E IGDDVE + +  +   D   E++ +
Sbjct: 64  IVFGGASRLREQIKNTRGVVSSEITVVLTGCPAEMIGDDVEAMAQEARDAGD---EVLDL 120

Query: 128 STPSYKHTHVEGYDSTVKALVENLATPSKPNSKLNVITGMVSPGD------IAETKRILR 181
           +T  ++ +   GY S + A VE    P    + L  I G V   D      I E  R++ 
Sbjct: 121 ATAGFRGSAYHGYQSFLLAAVERTVVPGPTRAGLVNILGPVPHQDATWLAEIEELSRLIA 180

Query: 182 EMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHANSAAKFL 241
            +G+           +  PF G           +  L+ TA +  ++SL     +A + L
Sbjct: 181 GVGL-------IPNPIFGPFGG-----------LSSLRATAQAELSVSLSPWGGAAVRAL 222

Query: 242 HEAYGINSV-SPYLPIGLQSTDEFMNELCKLTNKEIPEQ-----ITRERGK---LIDAMI 292
            + +GI  + S  LP+G  +T   +  +      E+ +      I RER +    ID ++
Sbjct: 223 DDRFGIPWIESAGLPVGAAATGALLERIVAAAG-EVDDAAARIFIDRERQREAYFIDRLL 281

Query: 293 DAHQHNFGRKVAIYGDPDV-VVGFTRFV-LELGMIP-SIVCTG---SESKTFVEDIKAVT 346
           +      G +      P + V G  RF+   LG  P +IV T    +E ++ +ED     
Sbjct: 282 ETLYRQGGARGFAVALPSLHVGGIVRFLNRTLGWSPAAIVVTDNPPAEHRSTLED----- 336

Query: 347 KDSKHKPVILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFP 399
                 PV+    D  ++   I  S  ++L G+S    +A    +PLI    P
Sbjct: 337 ----DLPVVHYSEDDDEIAALIGGSGAEILFGSSLERAVADRLAVPLIECAAP 385