Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 459 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 90/444 (20%), Positives = 185/444 (41%), Gaps = 53/444 (11%)

Query: 18  MGAIFALMGVKNSMPLIHGSHGCSTYMRFQLG---RHFKEAVNVASSSMSEANAVLGGEE 74
           +GA+ +++ +  ++P+ H   GC+T     L     +     +V S+++     + GG +
Sbjct: 31  LGALASVIAIPGAIPITHCGPGCATKQFHALSGINAYQGGEFHVPSTNLGNQEVIFGGAD 90

Query: 75  NLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIVPISTPSYKH 134
            L   I +  K+   ++  V T C+   +GDDV  ++R  K Q   +P IV   T  Y+ 
Sbjct: 91  RLDELIASTLKVMEADLFVVQTGCIPGLVGDDVGSVVR--KYQKRGVP-IVVAETSGYRG 147

Query: 135 THVEGYDSTVKALVENLATPSK---PNSKLNV--ITGMVSP---GDIAETKRILREMGIE 186
            +  G+++ ++A+++           +  +NV  +    +P   GD++E +RIL  +G++
Sbjct: 148 NNFTGHETVIRAIIDQFVDAGDAPLQHGLVNVWSLLPYQNPFWRGDLSEIRRILEGIGLQ 207

Query: 187 SIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHAN-SAAKFLHEAY 245
             IL                    A   V E +    +   + L      S A+ L E Y
Sbjct: 208 VNIL-----------------FGPASAGVAEWRAIPRAQFNLVLSPWLGLSTAQHLEELY 250

Query: 246 GINSV-SPYLPIGLQSTDEFMN---ELCKLTNKEIPEQITRERGKLIDAMID-------- 293
           G   +  P +PIG ++T  F+    E   L        I +E  +    + D        
Sbjct: 251 GQPFLHEPTIPIGAKATSAFLRRVVEFAGLDRARAEAFIAQEEKEHYVYLRDFACFYAGS 310

Query: 294 AHQHNFGRKVAIYGDPDVVVGFTRFVLE-LGMIPSIVCTGSE-----SKTFVEDIKAVTK 347
             Q+    +  +  +    +    F++E LG+ P              +T  +  +A+ +
Sbjct: 311 TSQYRLPSQAVVVSESAYNLAVASFLVEQLGLNPGPFVISENPPEELRETIQKQYRALAE 370

Query: 348 DSKHKPVILAPGD-LYDLHQEIK-KSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRVG 405
            S  + V    G  ++D+ +      ++ ++ G+++ + +A     PL+ +G+P  D V 
Sbjct: 371 HSGAEAVFEQDGKRIHDIVRATDFTGELPIVFGSTWEAALADQIGAPLVEIGYPCTDEVV 430

Query: 406 AQRITSLGYTAGIRLVDTITNTIL 429
             R   +GY   ++L++    T++
Sbjct: 431 LSR-AYVGYRGALQLIERTYTTVV 453