Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 511 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 96/435 (22%), Positives = 176/435 (40%), Gaps = 62/435 (14%)

Query: 27  VKNSMPLIHGSHGCST-------YMRFQLGRHFKEAVNVA--SSSMSEANAVLGGEENLK 77
           V++++ + H   GC+        + R  L R      NV   SS++ E + + GG E L+
Sbjct: 77  VRDAVLVQHSPIGCAAGHINSNAFFRNGLMRRGLAPRNVTGLSSNLIERDMIYGGAEKLR 136

Query: 78  HAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIVPISTPSYKHTH- 136
             I+   + + P+ + V TSC +  IGDDVE ++R    +++    +V +    +K  H 
Sbjct: 137 ATIKAAVERHQPKAVFVATSCATGIIGDDVESVVR--DCEDELGVPVVAMYCEGFKSKHW 194

Query: 137 VEGYDSTVKALVENLATPSKPNSKLNVITGMVSPGDIAETKRILREMGIE-SIILTDTSE 195
             G+D+    ++ ++  P     + N++  +V  G    T  +L E+G+E + ILT  S 
Sbjct: 195 SSGFDAIQHGVLRHVVKPKPGPRQDNLVNIIVLWGSDVFTP-MLAELGLEANNILTVAS- 252

Query: 196 SMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHANS-AAKFLHEAYGINSVSPYL 254
                              V+E+   + + A+ + C          L E YG+  +    
Sbjct: 253 -------------------VDEIARASEAAASATFCYSVGGYLGAALEEQYGVQEIKAPQ 293

Query: 255 PIGLQSTDEFMNELCKLTNKE--IPEQITRERGKLIDAMIDAHQHNFGRKVAIYGDPDVV 312
           P G   TD ++  L K T +E      I RE  ++   +    +   G +  +       
Sbjct: 294 PYGFDGTDAWLRALAKATGREERAEAYIAREHARVRPQIERLRERLKGVRGYVAMGAAYA 353

Query: 313 VGFTRFVLELGM-IPSIVCTGSESKTFVEDIKAVTKDSKHKPVILAPGDL---------- 361
            G    + ELG+ +P  +    +      D++  T       +I A GD+          
Sbjct: 354 HGVIGVLRELGVEVPGSLVFHHDPVYDSHDVRQDTLGH----MIDAYGDVEHFSISNRQP 409

Query: 362 YDLHQEIKKSKVDLLIGNSYG-SRIAGAENIPLIRMGFPIYDRVGAQRITSLGYTAGIRL 420
           Y  +  +K+S  D +I    G + +A    +P I +G            T++GY   I L
Sbjct: 410 YQFYNLLKRSDPDFIIIRHGGLAGLASRLGVPAIALG---------DASTAIGYQGMIDL 460

Query: 421 VDTITNTILDRYFDE 435
            + I + +  R F +
Sbjct: 461 GEEIVDALAQRKFHQ 475