Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 463 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 98/459 (21%), Positives = 190/459 (41%), Gaps = 77/459 (16%)

Query: 18  MGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVN---------VASSSMSEANA 68
           +GA+  +  +  ++P+ H   GC+      L   F  A             S++ ++   
Sbjct: 35  LGAMQTVAAIPRAIPITHCGPGCADKQCGALA--FNNAYQGGGWGGLGVAPSTNATQREV 92

Query: 69  VLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIVPIS 128
           + GGE  L+  + +  ++   ++  V T C+ + IGDDV  +++ F+ +      +V   
Sbjct: 93  IFGGENRLRELVTHTLELMEADLFVVLTGCIPDLIGDDVPAVVKEFQAKG---APVVYAG 149

Query: 129 TPSYKHTHVEGYDSTVKALVENLATPSKPNSKLNVITGMVSP---------GDIAETKRI 179
           T  ++  +  G++   +A+++  A+ +    + + +  + +P         GD+AE KR+
Sbjct: 150 TGGFRGNNYTGHEVVTRAIIDQFAS-TDAGPREHGLVNLWAPLPYQDPFWRGDLAELKRL 208

Query: 180 LREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHANSA-A 238
           L+ +G+   +L                   SAG  V E +    +   + L      A A
Sbjct: 209 LQGIGLRVNVLFGP---------------GSAG--VSEWRAIPRAQFNLVLSPWLGLATA 251

Query: 239 KFLHEAYGINSVSPYL-----PIGLQSTDEFMNELCKLTNKEIPEQIT--------RERG 285
           + L   +G     PYL     PIG + T EF+ ++       IP+           R+  
Sbjct: 252 QHLENKFG----QPYLHLPVPPIGGRQTSEFLRQVAAFAG--IPDAQAGAFIAAEERDYY 305

Query: 286 KLIDAMIDAH-QHNFG--RKVAIYGDPDVVVGFTRF-VLELGMIPS-IVCTGSESKTFVE 340
             I+A  + + Q+ +G   + A  GD    +  + F V +LG++P+ +V T +      +
Sbjct: 306 GYIEAFSEFYSQYRWGLPARFAAIGDAATTLSISSFAVRQLGLVPAVVVITDNTPPEHRD 365

Query: 341 DIKAVTKDSKH----KPVILAPGDLYDLHQEIKKS----KVDLLIGNSYGSRIAGAENIP 392
            I+A      H    +PV     D Y +H  I+ +    K  L+ G ++   +A      
Sbjct: 366 AIRAAFAKLDHDVGIEPVFAE--DSYAVHAAIRGADFGRKPPLIFGTTWERDLAKELRGF 423

Query: 393 LIRMGFPIYDRVGAQRITSLGYTAGIRLVDTITNTILDR 431
           ++ +GFP    V   R    GY   + L++ I  T + R
Sbjct: 424 ILEVGFPASYEVVLSR-GYAGYRGALTLIERIYTTAISR 461