Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 540 a.a., ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B from Rhodopseudomonas palustris CGA009

 Score = 64.7 bits (156), Expect = 7e-15
 Identities = 91/436 (20%), Positives = 171/436 (39%), Gaps = 53/436 (12%)

Query: 18  MGAIFALMGVKNSMPLIHGSHGCSTY--MRFQLGRHFKEAVNVASSSMSEANAVLGGEEN 75
           +GA+    G++    ++H   G  TY  + F +     +   V  ++ +  +      E 
Sbjct: 14  VGAMRVATGMEKLHYVLHAPQG-DTYADLLFTMIERRNKRPPVTYTTFAARDLGKDTAEL 72

Query: 76  LKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIVPISTPSYKHT 135
              A RN    + P+ + V  SC    I DD  G   L K+    +P ++PI  P+Y+  
Sbjct: 73  FMSAARNAYARFKPQAMIVGASCTGSLIQDDPGG---LAKSLGFSIP-VIPIDLPAYQRK 128

Query: 136 HVEGYDSTVKALVENLATPSKP-------------NSKLNVI----TGMVSPGDIAETKR 178
              G   T   LV  +A P  P              +K N++     G     DI E  R
Sbjct: 129 ENWGASETFYQLVRAIAGPKAPAPGTKRPERAAGQRAKCNLLGPTALGFRHRDDITEITR 188

Query: 179 ILREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANS-FATISLCKHANSA 237
           +L ++GI                  +V+ V+  G T  +L     + F  +   + A+ A
Sbjct: 189 LLGQLGI------------------DVNVVAPMGATPADLTRLGEADFNVVLYPEVASQA 230

Query: 238 AKFLHEAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGKLIDAMIDAHQH 297
           A +L   +     +  +PIG+ +T EF+ E+  L   + PE +       +     +   
Sbjct: 231 ASWLQRIFH-QPFTKTIPIGVSATREFVREVAGLAGVD-PEPVLAAASTRLPWYSHSVDS 288

Query: 298 NF--GRKVAIYGDPDVVVGFTRFVL-ELGMIPSIVCTGSESKTFVEDIKAVTKDSKHKPV 354
            +   ++V I+GD    +   R    ELG    +V  G+ S+ F  D++     +K+   
Sbjct: 289 TYLTNKRVFIFGDATHAIASARIASEELGF--KVVGLGTYSREFGRDVREAA--AKYGVE 344

Query: 355 ILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIY-DRVGAQRITSLG 413
            L   D  ++  ++ +   +L++G      IA    +P   +  P++     A+    +G
Sbjct: 345 ALITDDYLEVEAKVAELHPELVLGTQMERHIAKRLGVPCAVISAPVHVQDFPARYAPQMG 404

Query: 414 YTAGIRLVDTITNTIL 429
           +     + DT  + ++
Sbjct: 405 FEGANVIFDTWVHPLM 420