Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 460 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Rhodopseudomonas palustris CGA009

 Score = 50.8 bits (120), Expect = 9e-11
 Identities = 90/438 (20%), Positives = 174/438 (39%), Gaps = 64/438 (14%)

Query: 19  GAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFK--EAVNVA-SSSMSEANAVLG-GEE 74
           GA  AL+ + ++  ++HG  GC+       G      +   +  ++ +S+ + ++G GE+
Sbjct: 41  GARNALLPIADAAHIVHGPIGCAGSSWDNRGSRSSGSDLYRIGMTTDLSDMDVIMGRGEK 100

Query: 75  NLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIVPISTPSYKH 134
            L  AIR + + Y P  + V  +C+    GDDV+ + +   ++   LP ++PI    +  
Sbjct: 101 RLYGAIRYIIERYKPAAVFVYVTCIPALQGDDVDSVAKT-ASERFGLP-VIPIDCAGFYG 158

Query: 135 THVEGYDSTVKALVENLATPSKPN------------SKLNVITGMVSPGDIAETKRILRE 182
               G      A+V ++    +P+              +N+I      G+      +  E
Sbjct: 159 NKNLGNRIAGDAMVRHVIGTREPDPLPASAAFDGTVHDVNLIGEWNVGGEFWNVAPLFDE 218

Query: 183 MGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHAN-SAAKFL 241
           +G+  +            F G+  F         E++    + A + +C  A    A+ L
Sbjct: 219 LGLRIL----------CSFSGDSRF--------REVQTMHRARANMVVCSKAMIHVARKL 260

Query: 242 HEAYGINSVSPYLP---IGLQST-DEFMNELCKLTNKEIPEQ----ITRERGKLIDAMID 293
           HE++G    +PY      G++ T D F N    L + ++  +    I RE  +    +  
Sbjct: 261 HESFG----APYFEGSFYGVRDTSDAFRNFARLLGDPDLAARTEVLIAREEARTAAELAA 316

Query: 294 AHQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVTKDSKHKP 353
                 G++V ++            + +LG+   +V TG+E  T  E+ KA  +D     
Sbjct: 317 IRPRVAGKRVLVFAGGYKSWSLVSAMQDLGV--EVVATGTEKST--EEDKARIRDLMGTQ 372

Query: 354 V-ILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRVGAQRITSL 412
             ++   D   L       + D+L+    G R       P ++   P  D    +RI   
Sbjct: 373 ARMIEDNDQRALITAFHDCRADVLVA---GDRYI----FPAMKSRLPFLDIDHVRRIGYA 425

Query: 413 GYTAGIRL---VDTITNT 427
           GY+  + L   +D + N+
Sbjct: 426 GYSGILELARNLDAVANS 443