Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  303 bits (777), Expect = 7e-87
 Identities = 159/448 (35%), Positives = 256/448 (57%), Gaps = 26/448 (5%)

Query: 10  NPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASSSMSEANAV 69
           N CK+C P+GA+ A  GV+ ++P +HGS GC+TYMR  +  H++E +++ASSS+ E  AV
Sbjct: 79  NACKLCTPLGAMLAFRGVEGAVPFLHGSQGCATYMRRYVISHYREPMDIASSSLGEKQAV 138

Query: 70  LGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQ--NDDLPEIVPI 127
            GG  NLK  I NV K Y P ++GV T+CL+ETIGDDV G +R F+ +  + DLPEIV +
Sbjct: 139 YGGGPNLKKGILNVMKKYDPVLVGVATTCLTETIGDDVGGYLREFRNEFGDLDLPEIVHV 198

Query: 128 STPSYKHTHVEGYDSTVKALVENLATPS-KPNSKLNVITGMVSPGDIAETKRILREMGIE 186
            TPSY  TH+EG+ + V+ALV+ LA    +P+ K+ ++ G VSP D+   + ++ + G +
Sbjct: 199 HTPSYNGTHLEGWHAAVRALVDQLARDRVEPHGKVALLPGFVSPADLRHLRDLITDFGSD 258

Query: 187 SIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKH------------- 233
           ++IL D S+ +D P   + + +   GT + +++  + +   I   +              
Sbjct: 259 AVILPDLSDPLDGPALEDYTPLPEGGTPLADIRALSGAAGVIECGRSLAMTPTGSSGSSG 318

Query: 234 ---------ANSAAKFLHEAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRER 284
                      +A + L E +G+   +  LPIGL+ TD  ++ L  +T K +P +   ER
Sbjct: 319 SSGSSGSAGPATAGRVLDERFGLPLHAVGLPIGLRETDALVSALEAITGKPLPHKHELER 378

Query: 285 GKLIDAMIDAHQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKA 344
           G+ +DA++D H++  G++  +YG+ D+V+G    + E+G+   +  TG       E I A
Sbjct: 379 GRFVDALVDGHKYVSGKRAVVYGEADLVIGLVSLLTEIGVHTVLAATGMRGAHLAESIAA 438

Query: 345 VTKDS-KHKPVILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDR 403
           VT+      P ++   D  ++    +    DLL+GNS G R A   NIPL+R GFPI+DR
Sbjct: 439 VTEGMLPAMPTVIEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIPLVRAGFPIHDR 498

Query: 404 VGAQRITSLGYTAGIRLVDTITNTILDR 431
            G  R+  +GY     L+D I N ++++
Sbjct: 499 FGGHRLLHVGYAGAQALMDRIVNAVIEK 526