Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 544 a.a., nitrogenase molybdenum-iron protein alpha chain (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 48.1 bits (113), Expect = 7e-10
 Identities = 70/339 (20%), Positives = 122/339 (35%), Gaps = 59/339 (17%)

Query: 15  CQPMGAIFALMG-VKNSMPLIHGSHGCSTYM----RFQLGRHFKEAVNVA----SSSMSE 65
           C   G    ++G  ++ + + HG  GC  Y     R Q     + + N      S+ M +
Sbjct: 64  CTYAGCKGVILGPTRDIVNITHGPIGCGFYSWLTRRNQTKAPLESSENFMPYAFSTDMQD 123

Query: 66  ANAVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDLPEIV 125
            + + GGE+ L  AI+     + P+ I +  +C    IGDD+  + R  K +      I 
Sbjct: 124 EDIIFGGEKKLIAAIQEAYDTFHPKAIAIFATCPVGLIGDDIHAVARKMKEKLG--INIF 181

Query: 126 PISTPSYK---------------HTHVEGYDSTVKALVENLATPSKPNSKLNVITGMVSP 170
             S   YK                THV G D           TP     K+N++      
Sbjct: 182 AFSCEGYKGVSQSAGHHIANNQIFTHVVGEDD----------TPKLGEYKINMLGEYNIG 231

Query: 171 GDIAETKRILREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISL 230
           GD  E +R+L + GI          ++ + F G  ++   A     +L         +  
Sbjct: 232 GDAFELERVLEKCGI----------TLVSTFSGNSTYEHFATAHQADLN-------AVMC 274

Query: 231 CKHANSAAKFLHEAYGINSVSPYLPIGLQSTDEFMNELC-----KLTNKEIPEQITRERG 285
            +  N  A+ +   YGI  +     IG +S+ + + ++      K     + E I  E  
Sbjct: 275 HRSINYVAEMMETKYGIPWIKVNF-IGAESSAKSLRKIAQYFGDKKLIDRVEEVIAEEMP 333

Query: 286 KLIDAMIDAHQHNFGRKVAIYGDPDVVVGFTRFVLELGM 324
            +  A+ D      G+   ++        +     E+GM
Sbjct: 334 AVHAALEDVKPFTEGKTAMLFVGGSRAHHYQDLFTEMGM 372