Pairwise Alignments

Query, 458 a.a., nitrogenase from Methanococcus maripaludis S2

Subject, 462 a.a., nitrogenase molybdenum-cofactor synthesis protein NifN protein from Herbaspirillum seropedicae SmR1

 Score =  238 bits (606), Expect = 4e-67
 Identities = 140/435 (32%), Positives = 242/435 (55%), Gaps = 17/435 (3%)

Query: 2   TEKKFAVINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASS 61
           T  K A +NP K+ QP+GA +A +G+   MP++HGS GC+++    L RHF+EA+ + ++
Sbjct: 6   TSSKAAAVNPLKMSQPLGAAYAFLGMNRCMPVMHGSQGCTSFGLVLLVRHFREAIPLQTT 65

Query: 62  SMSEANAVLGGEENLKHAIRNVSKIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQNDDL 121
           +M+E +++LGG EN++ A+ N+     P++I + ++ L+ET GDDV   +RL + ++ DL
Sbjct: 66  AMNEVSSILGGMENIEKAVLNIRLRAKPDLIAICSTGLTETKGDDVNAYLRLIRQKHPDL 125

Query: 122 PE--IVPISTPSYKHTHVEGYDSTVKALVENLATP----SKPNSKLNVITGM-VSPGDIA 174
            +  +  +STP Y     +G+   V+AL+  L  P         ++N++ G  ++P DI 
Sbjct: 126 ADTALAYVSTPDYTGAFQDGWAKAVEALIRALGEPQPGLQTRAKQINLLAGCHLTPADIE 185

Query: 175 ETKRILREMGIESIILTDTSESMDAPFDGEVSFVSSAGTTVEELKDTANSFATISLCKHA 234
           E + I++  G+E I+L D S S+D       S  S  GTT+ E++    S  +I++ +  
Sbjct: 186 ELRDIVQSFGLEPIVLPDVSSSLDGHLPDNFSPTSMGGTTLAEMRALGASIVSIAIGEQM 245

Query: 235 NSAAKFLHEAYGINSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGKLIDAMIDA 294
            ++A+ + E  G+  V      GLQ+ D F+  L  ++ + IP +  R+R +L DAM+D 
Sbjct: 246 RASAQAVQELSGVPYVVFDRLTGLQANDRFLAYLEYVSGQPIPARYRRQRSQLQDAMLDG 305

Query: 295 HQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVTKDSKHKPV 354
           H    G KVAI  +PD+++  + ++ E+G    I C  + + + V D     +       
Sbjct: 306 HFFFGGVKVAIGAEPDLLLSLSAWLAEMGC--EIGCAVTTTTSPVLDGVPAAR------- 356

Query: 355 ILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRVGAQRITSLGY 414
            +  GDL DL Q  +++   LL+ +S+G + A   +IP  R G P++DR+GA    S+GY
Sbjct: 357 -VVIGDLEDLEQGARRASAGLLVTHSHGRQAAERLHIPFHRAGLPMFDRLGAGHCLSVGY 415

Query: 415 TAGIRLVDTITNTIL 429
                L+  I N +L
Sbjct: 416 RGTRGLIFEIGNLLL 430