Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 500 a.a., NifD nitrogenase molybdenum-iron protein alpha chain from Sinorhizobium meliloti 1021

 Score =  295 bits (755), Expect = 2e-84
 Identities = 165/423 (39%), Positives = 250/423 (59%), Gaps = 11/423 (2%)

Query: 64  STPGMITQRSCVYGGAR-VVLMPITDAVHLVHGPIGCAACTWDIRGSKSTG----DKLYK 118
           S PG++T R C Y G++ VV  PI D VH+ HGP+GC   +W  R +   G    D    
Sbjct: 62  SIPGVMTIRGCAYAGSKGVVWGPIKDMVHISHGPVGCGQYSWSQRRNYYVGTTGIDAFVT 121

Query: 119 NGFSTDLQEKDIVFGGEKKLYESILEVNKLYH-PGAIFVYSTCVVGLIGDDLKAVCRQAQ 177
             F++D QEKDIVFGG+KKL + I E+ +L+     + V S C +GLIGDD++AV R+  
Sbjct: 122 MQFTSDFQEKDIVFGGDKKLEKIIDEIEELFPLNNGVTVQSECPIGLIGDDIEAVSRKKA 181

Query: 178 EATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPE-EEHPYSINIIGEFNVAG 236
           E     ++PV+ EGF+  +++ GH +A DA+ D+V  T E   E   Y +N+IG++N+ G
Sbjct: 182 EEYKTTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDTTEVAYEAGRYDVNVIGDYNIGG 241

Query: 237 DLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIP 296
           D W    L E++G+ V    +GD+T+A++  A  +KLN++ C +S NY+   ME+KYG+P
Sbjct: 242 DAWASRILLEEIGLHVVGNWSGDATLAEIERAPTAKLNLIHCYRSMNYICRHMEEKYGVP 301

Query: 297 SIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDE-ISEYKKDLSGRTV 355
            ++ NFFG  +   SLR +A+ FG E  I+   E + ++   L D  I +Y   L G+ V
Sbjct: 302 WMEYNFFGPSQIEASLRQIAKHFGPE--IEERAERVIAKYSGLTDAVIDKYWPRLHGKRV 359

Query: 356 AIYSGAHKSWALVSAFGELDMEIIMSGTQNGKPEDYQQIRDHVCEGTLIVDDASSMELVQ 415
            +Y G  +   +++A+ +L MEI+ +G +    +DYQ+   +V EGTLI DD +  EL +
Sbjct: 360 MLYVGGLRPRHVITAYEDLGMEIVGTGYEFAHNDDYQRTGHYVKEGTLIYDDVTGYELEK 419

Query: 416 LLKEYKPDILISGAKEKYLSLKSGIPHCDFNH-DRITAFSGYQGFINFARVVHTAVMTPI 474
            ++  +PD++ SG KEKY   K GIP    +  D    + GY GF  FAR +  AV  P+
Sbjct: 420 FIERIRPDLVGSGIKEKYSVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDLAVNNPV 479

Query: 475 WRL 477
           W L
Sbjct: 480 WDL 482