Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 462 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score = 43.1 bits (100), Expect = 2e-08
 Identities = 84/412 (20%), Positives = 163/412 (39%), Gaps = 64/412 (15%)

Query: 73  SCVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIVF 132
           +C   GA+   + I D + +VHG  GC      +R   S   K      S+ + E   VF
Sbjct: 19  TCQPAGAQYASIGIKDCIGIVHGGQGCVMF---VRLLISQHLKESFEIASSSVHEDGAVF 75

Query: 133 GGEKKLYESILEVNKLYHPG--AIFVYSTCVVGLIGDDLKAVCRQAQEA--------TGC 182
           G   ++ E  ++V  + +P    I + +TC   +IGDD+  V R+ +E            
Sbjct: 76  GALDRV-EQAVDVLLMRYPDVKVIPIITTCSTEVIGDDVDGVVRKLEEGLLKEKFPDREV 134

Query: 183 RVIPVQSEGF----------------KSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSI 226
            +IP+ +  F                K+F K     L  + +  +V   +  E +H    
Sbjct: 135 HLIPIHTPSFVGSMVTGYDVAVRDFVKAFAKKGKPSLKINLITGWVNPGDVKELKH---- 190

Query: 227 NIIGEFNVAGDLWGII-----PLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKS 281
            ++ E  V  ++   I     PL        H + T D  +    +     LN  +  K+
Sbjct: 191 -LLAEMRVEANVLFEIESFDSPLMPDKSAVSHGSTTIDDLIDTANAQGTIALNRYEGAKA 249

Query: 282 SNYLAAQMEKKYGIPSIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRD 341
           + +L    +K + +P++      +  T   +R    F  + +++  T + I   +   R 
Sbjct: 250 AEFL----QKGFDVPAV------IGPTPIGIRNTDTFLQNLKIM--TGKAIPPSLVRERG 297

Query: 342 EISEYKKD-----LSGRTVAIYSGAHKSWALVSAFGELDME--IIMSGTQNGKPEDYQQI 394
              +   D     L+ + VAIY        L     +L+M+  +++ G +N   E   +I
Sbjct: 298 IAIDALTDLVHMFLADKKVAIYGNPDLVIGLAEFCLDLEMKPMLLLLGDENAGYETDPRI 357

Query: 395 R---DHVCEGTLIVDDASSMELVQLLKE--YKPDILISGAKEKYLSLKSGIP 441
           +   + V     I+ +A   EL   +K    + D+++  +K ++ ++ + IP
Sbjct: 358 KALQERVDHDMEIITNADLWELEDRVKNKGLELDLILGHSKGRFTAIDNNIP 409