Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 510 a.a., Nitrogenase molybdenum-iron protein beta chain (NCBI) from Rhodospirillum rubrum S1H

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 86/403 (21%), Positives = 147/403 (36%), Gaps = 48/403 (11%)

Query: 72  RSCVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIV 131
           ++C   GA          +  VHG  GCAA     R   S   K   +  S  + E   V
Sbjct: 68  KACQPLGALFAAAGFDGTLGYVHGSQGCAAY---FRSHLSRHFKEASSVVSDSMTEDAAV 124

Query: 132 FGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRV-IPVQSE 190
           FGG   + + +     LY P  I V ++C+  +IGDD+ +    A+         PV   
Sbjct: 125 FGGLNNMVDGLANAYALYKPKMIAVCTSCMAEVIGDDISSFIGNAKTKESIPADFPVPFA 184

Query: 191 GFKSFNKTAGHKLACDAMLDYVIGT---EEPEEEHPYSINIIGEFN--VAGDLWGIIPLY 245
              SF     H +  D M+  ++ T    +  +     INII  F+    G++  +  + 
Sbjct: 185 HTPSF--VGSHIVGYDNMMKGILTTFWDGKVRDAATDKINIIPGFDGYSVGNIRELKRIL 242

Query: 246 EKMGVKVHT---------------------AITGDSTVAKVASAHRSKLNIVQCQKSSNY 284
             +GV+                          T D T+A + +     L+      +  +
Sbjct: 243 GMIGVEYTVLSDTSDVYDTPTDGEFRMYDGGTTQDDTIAALQAKATLSLSEYCTPATLKF 302

Query: 285 LAAQMEKKYGIPSIKVNF-FGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEI 343
           +A     + G  +   N+  G+  T   L  +    G     K   E +  E   L D +
Sbjct: 303 IA-----ETGQETAAFNYPMGVGATDDFLVKLVALTG-----KDIPEALTKERGRLVDAL 352

Query: 344 SEYKKDLSGRTVAIYSGAHKSWALVSAFGELDMEIIMSGTQNGKPEDYQQIRDHVC---- 399
           ++    L G+ +A+Y     + ++V    E+ +E +     NG  +  +Q++  +     
Sbjct: 353 ADSMTWLHGKKMAVYGDPDFTLSMVRFLLEMGVEPVHVLATNGTKKWEKQVKALLATSPF 412

Query: 400 -EGTLIVDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIP 441
            +   +        L  LL     D LI  +  KYL L  GIP
Sbjct: 413 GKDAQVWQGKDLWHLRSLLATEPADFLIGNSYGKYLELDLGIP 455