Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 487 a.a., Nitrogenase molybdenum-iron protein alpha chain (NCBI) from Rhodospirillum rubrum S1H

 Score =  309 bits (792), Expect = 1e-88
 Identities = 174/472 (36%), Positives = 274/472 (58%), Gaps = 15/472 (3%)

Query: 19  DDFDLEVKIPNSIFEKLKSIEALKARESQMCVSGKDDSIPTCDKNST----PGMITQRSC 74
           +D +L  K    + E     +A K R+  +     +    +C   S     PG++T R C
Sbjct: 7   NDAELSQKAIEEVLEAYPE-KAAKKRKKHLGTIVAEGEGSSCGVKSNVKAIPGVMTIRGC 65

Query: 75  VYGGAR-VVLMPITDAVHLVHGPIGCAACTWDIRGSKSTG----DKLYKNGFSTDLQEKD 129
            Y G++ VV  P+ D VH+ HGP+GC   +W  R +  TG    D      F++D QEKD
Sbjct: 66  AYAGSKGVVWGPVKDMVHISHGPVGCGQYSWSQRRNYFTGQVGVDSFVTMQFTSDFQEKD 125

Query: 130 IVFGGEKKLYESILEVNKLYH-PGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQ 188
           IVFGG+KKL + I E+  L+     I + S C +GLIGDD++AV R+  +  G  +IPV+
Sbjct: 126 IVFGGDKKLEKVIDEIKGLFPLVRGISIQSECPIGLIGDDIEAVARKKAKDVGLPIIPVR 185

Query: 189 SEGFKSFNKTAGHKLACDAMLDYVIG--TEEPEEEHPYSINIIGEFNVAGDLWGIIPLYE 246
            EGF+  +++ GH +A DA+ D+V    +E   E  PY +NIIG++N+ GD W    L E
Sbjct: 186 CEGFRGVSQSLGHHIANDAIRDWVFSRDSESAFETTPYDVNIIGDYNIGGDAWASRILLE 245

Query: 247 KMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPSIKVNFFGLD 306
           +MG++V    +GD+T+A++  A ++KLN++ C +S NY+   ME+K+G+P ++ NFFG  
Sbjct: 246 EMGLRVIAQWSGDATIAEMERAPKAKLNLIHCYRSMNYICRHMEEKHGVPWMEYNFFGPS 305

Query: 307 ETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWA 366
           +  KSLRA+A  F DE + K+ EE+I +    +   I++YK  L G+ V +Y G  +   
Sbjct: 306 QIEKSLRAIAANF-DETIQKKAEEVIAAHRPTVDAVINKYKARLEGKRVMLYVGGLRPRH 364

Query: 367 LVSAFGELDMEIIMSGTQNGKPEDYQQIRDHVCEGTLIVDDASSMELVQLLKEYKPDILI 426
           +++A+ +L M+I  +G +    +DYQ+  ++  EGTLI DD +  EL + +++ +PD++ 
Sbjct: 365 VMTAYEDLGMQICGAGYEFAHSDDYQRTTEYAKEGTLIYDDLTGYELERFIEKLRPDLVG 424

Query: 427 SGAKEKYLSLKSGIPHCDFNH-DRITAFSGYQGFINFARVVHTAVMTPIWRL 477
           SG KEKY   K G+P    +  D    + GY GF  FAR +  A+  P+W L
Sbjct: 425 SGIKEKYAVQKMGVPFRQMHSWDYSGPYHGYDGFAIFARDMDMAINNPVWAL 476