Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 511 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  125 bits (315), Expect = 3e-33
 Identities = 103/409 (25%), Positives = 189/409 (46%), Gaps = 49/409 (11%)

Query: 86  ITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGF-------------STDLQEKDIVF 132
           +  AV + H PIGC A        +   + +++NG              ST+L+E+D+V+
Sbjct: 78  VRGAVLVQHSPIGCGA-------GQVIYNSIFRNGLAIRGLPVENLHLISTNLRERDMVY 130

Query: 133 GGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGF 192
           GG  KL  +I +  + +HP AIF+ ++C   +IGDD+++V  Q +   G  VIP+  EGF
Sbjct: 131 GGLDKLERTIRDAWERHHPQAIFIATSCPTAIIGDDIESVASQLEAEFGIPVIPLHCEGF 190

Query: 193 KSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGDLWG---IIPLYEKMG 249
           KS + + G       +L  ++  + PE +    +N+I       +LWG     P+  ++G
Sbjct: 191 KSKHWSTGFDATQHGILRQIV-RKNPERKQEDLVNVI-------NLWGSDVFGPMLGELG 242

Query: 250 VKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPSIKVNF-FGLDET 308
           ++V+  +   +TV  +A    +   +  C   S Y+AA +E+++G+P +K    +G   T
Sbjct: 243 LRVN-YVVDLATVEDLAQMSEAAATVGFCYTLSTYMAAALEQEFGVPEVKAPMPYGFAGT 301

Query: 309 TKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWALV 368
              LR +A     EE   + E  I  E   ++ ++   ++ L G    + +G+  +  ++
Sbjct: 302 DAWLREIARVTHREE---QAEAYIAREHARVKPQLEALREKLKGIKGFVSTGSAYAHGMI 358

Query: 369 SAFGELDMEIIMS---------GTQNGKPEDYQQIRDHVCE-GTLIVDDASSMELVQLLK 418
               EL + +  S          +Q+ + +    + D+  + G   V +    +   LL+
Sbjct: 359 QVLRELGVTVDGSLVFHHDPVYDSQDPRQDSLAHLVDNYGDVGHFSVGNRQQFQFYGLLQ 418

Query: 419 EYKPD-ILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFARVV 466
             KPD I+I       L+ + GIP      + I    GYQG +N    +
Sbjct: 419 RVKPDFIIIRHNGLAPLASRLGIPAIPLGDEHIAV--GYQGILNLGESI 465