Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 460 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 91/354 (25%), Positives = 154/354 (43%), Gaps = 52/354 (14%)

Query: 37  SIEALKARESQMCVSGKDDSIPTCDKNSTPGMITQRSCVYGGARVVLMPITDAVHLVHGP 96
           +I ALK+R +++         P  DK+    ++     +  GA      I   V + H  
Sbjct: 2   AILALKSRPTEIT--------PDADKSGAIELVRYVCAI--GAMQTAAAIPRVVPITHCG 51

Query: 97  IGCAACTWDIRGSKSTGDKLYKNGF------------STDLQEKDIVFGGEKKLYESILE 144
            GCA         K   +  + NGF            ST+  +++++FGG  +L E ++E
Sbjct: 52  PGCA--------DKQYMNLTFYNGFQGSGYGGGPVVPSTNASQREVIFGGADRLRE-LIE 102

Query: 145 VNKLYHPGAIFVYST-CVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGFKSFNKTAGHKL 203
            ++L     +FV  T C+  L+GDD+ +V R  Q+  G  ++  ++ GF+  N T GH+ 
Sbjct: 103 SSQLVLDADLFVVLTGCIPDLVGDDVGSVVRDFQK-RGVPIVYAETGGFRGNNFT-GHEA 160

Query: 204 ACDAMLDYVI----GTEEPEEEHPYSINIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGD 259
              A+++  +    G  E    + +S+         GDL  I  L E +G+KV+     D
Sbjct: 161 VTHAIIEQYLGPWDGVREQGTVNLWSLLPYQNTFWRGDLEEIKRLLEGIGLKVNVLFGPD 220

Query: 260 ST-VAKVASAHRSKLNIVQCQ----KSSNYLAAQMEKKY-GIPSIKVNFFGLDETTKSLR 313
           S  +++  +  R++ N+V        ++  LA + E+ Y  IP + +   G  E+   LR
Sbjct: 221 SEGLSEWRNIPRAQFNLVLSPWLGLSTAELLARRYEQPYLHIPVVPI---GARESGAFLR 277

Query: 314 AVAEFFG-----DEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAH 362
            VA F G      E  I + E+   + I    D  SEY   L  R   I   A+
Sbjct: 278 KVAAFAGIPADVVEAFIAKEEKRYYNYIDGFTDFYSEYWWGLPARFAVIGDSAY 331