Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 502 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score =  131 bits (330), Expect = 5e-35
 Identities = 109/413 (26%), Positives = 189/413 (45%), Gaps = 49/413 (11%)

Query: 86  ITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGF-------------STDLQEKDIVF 132
           I DAV + H PIGC A        +   + +Y+NG              ST+L+E+D+V+
Sbjct: 76  IRDAVLIQHSPIGCGA-------GQVIYNSIYRNGLAMRGLPVQNIRFISTNLRERDMVY 128

Query: 133 GGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGF 192
           GG +KL E+I    + + P A+F+ ++C  G+IGDD+++V R A+   G  +IP+  EGF
Sbjct: 129 GGAEKLAEAIRLAVERHQPKAVFIATSCASGIIGDDIESVARTAEAEFGIPIIPLHCEGF 188

Query: 193 KSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGDLWG---IIPLYEKMG 249
           KS + + G       +L  ++    P++     IN+I       +LWG     P+  ++G
Sbjct: 189 KSKHWSTGFDATQHGILRQIV-RRNPDKRQDDLINVI-------NLWGTDVFSPMLGELG 240

Query: 250 VKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPSIKV-NFFGLDET 308
           ++V+  +   +TV ++A    ++  +  C     YLA  +E+++G+  IK    +G   T
Sbjct: 241 LRVN-YVVDMATVEELAQMSEARATVSFCYTLGTYLATALEQEFGVEQIKAPQPYGFAGT 299

Query: 309 TKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWALV 368
              LR +A   G E    + E+ I  E   ++  + E +  L G    + +G+  S  L+
Sbjct: 300 DAWLRELARVTGRE---AQAEDYIAREHARVKPLLDELRPKLKGLKGYVATGSAYSHGLI 356

Query: 369 SAFGELDMEIIMSGTQNGKP-----EDYQQIRDHVCEG-----TLIVDDASSMELVQLLK 418
               E+ +E+  S   +  P     +  Q    H+ E         V +    +   LL+
Sbjct: 357 GVLREIGVEVDGSLVFHHDPVYDSEDPRQDSLGHLIENYGDVRHFTVGNRQQYQFYNLLQ 416

Query: 419 EYKPD-ILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFARVVHTAV 470
             KPD I+I       L+ + GIP      +      GYQG +N    +  A+
Sbjct: 417 RVKPDFIIIRHNGLAPLAARLGIPAIPLGDEHHAL--GYQGMVNLGESILAAL 467