Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 501 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score =  116 bits (291), Expect = 2e-30
 Identities = 85/308 (27%), Positives = 159/308 (51%), Gaps = 34/308 (11%)

Query: 86  ITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKN-------------GFSTDLQEKDIVF 132
           I D+V + H PIGCAA       S+S   + Y++                T+L E+D+VF
Sbjct: 76  IQDSVVVQHSPIGCAA-------SQSFTARYYRDLAARRGWKLEDPKSICTNLGEQDMVF 128

Query: 133 GGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGF 192
           GG  +L ++I +  + + P  IFV ++C  G+IGDD+    ++ ++  G  V+ +  EGF
Sbjct: 129 GGVARLEDTIRDAYERHKPRVIFVATSCATGIIGDDVDGAAKRVEDEIGIPVVTLHCEGF 188

Query: 193 KSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAG-DLWGIIPLYEKMGVK 251
           KS + ++G  +    +L  ++   EP  + P  IN+I   ++ G D++   PL   +G++
Sbjct: 189 KSKHWSSGWDVIEHGILRRLV--PEPPRKQPDLINVI---HLGGPDVFS--PLLNPLGLR 241

Query: 252 VHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPSIKVNF-FGLDETTK 310
           V+  + G +T+ ++A    +   +  C   S YLA  +E+++G+P ++    +GLD T  
Sbjct: 242 VN-LVMGGNTLERLAQMSEAAATVTMCFVLS-YLATGLEQQFGVPEVRAPLPYGLDATDN 299

Query: 311 SLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWALVSA 370
            LR +A   G  +   + E +I SE   +   ++  +K L+G+   + +GA  +  L++ 
Sbjct: 300 WLRDIARLTGTSD---KVEAVIASERARVAPGLARLRKALTGKRGFVAAGAAFAHGLLAD 356

Query: 371 FGELDMEI 378
             EL + +
Sbjct: 357 LRELGVTV 364