Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 511 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score =  127 bits (320), Expect = 7e-34
 Identities = 113/408 (27%), Positives = 191/408 (46%), Gaps = 39/408 (9%)

Query: 86  ITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGF--------STDLQEKDIVFGGEKK 137
           + DAV + H PIGCAA    I  +    + L + G         S++L E+D+++GG +K
Sbjct: 77  VRDAVLVQHSPIGCAA--GHINSNAFFRNGLMRRGLAPRNVTGLSSNLIERDMIYGGAEK 134

Query: 138 LYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIPVQSEGFKSFNK 197
           L  +I    + + P A+FV ++C  G+IGDD+++V R  ++  G  V+ +  EGFKS + 
Sbjct: 135 LRATIKAAVERHQPKAVFVATSCATGIIGDDVESVVRDCEDELGVPVVAMYCEGFKSKHW 194

Query: 198 TAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGDLWG---IIPLYEKMGVKVHT 254
           ++G       +L +V+   +P       +NII        LWG     P+  ++G++ + 
Sbjct: 195 SSGFDAIQHGVLRHVV-KPKPGPRQDNLVNII-------VLWGSDVFTPMLAELGLEANN 246

Query: 255 AITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPSIKV-NFFGLDETTKSLR 313
            +T  ++V ++A A  +  +   C     YL A +E++YG+  IK    +G D T   LR
Sbjct: 247 ILT-VASVDEIARASEAAASATFCYSVGGYLGAALEEQYGVQEIKAPQPYGFDGTDAWLR 305

Query: 314 AVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWALVSAFGE 373
           A+A+  G EE   R E  I  E   +R +I   ++ L G    +  GA  +  ++    E
Sbjct: 306 ALAKATGREE---RAEAYIAREHARVRPQIERLRERLKGVRGYVAMGAAYAHGVIGVLRE 362

Query: 374 LDMEIIMSGTQNGKP-EDYQQIRD----HVCEG-----TLIVDDASSMELVQLLKEYKPD 423
           L +E+  S   +  P  D   +R     H+ +         + +    +   LLK   PD
Sbjct: 363 LGVEVPGSLVFHHDPVYDSHDVRQDTLGHMIDAYGDVEHFSISNRQPYQFYNLLKRSDPD 422

Query: 424 -ILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFARVVHTAV 470
            I+I       L+ + G+P      D  TA  GYQG I+    +  A+
Sbjct: 423 FIIIRHGGLAGLASRLGVPAIALG-DASTAI-GYQGMIDLGEEIVDAL 468