Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 463 a.a., nitrogenase component 1 from Rhodopseudomonas palustris CGA009

 Score = 81.3 bits (199), Expect = 7e-20
 Identities = 88/346 (25%), Positives = 148/346 (42%), Gaps = 41/346 (11%)

Query: 78  GARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGF------------STDL 125
           GA   +  I  A+ + H   GCA         K  G   + N +            ST+ 
Sbjct: 36  GAMQTVAAIPRAIPITHCGPGCA--------DKQCGALAFNNAYQGGGWGGLGVAPSTNA 87

Query: 126 QEKDIVFGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVI 185
            +++++FGGE +L E +    +L       V + C+  LIGDD+ AV ++ Q A G  V+
Sbjct: 88  TQREVIFGGENRLRELVTHTLELMEADLFVVLTGCIPDLIGDDVPAVVKEFQ-AKGAPVV 146

Query: 186 PVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNV-----AGDLWG 240
              + GF+  N T GH++   A++D    T+    EH   +N+            GDL  
Sbjct: 147 YAGTGGFRGNNYT-GHEVVTRAIIDQFASTDAGPREHGL-VNLWAPLPYQDPFWRGDLAE 204

Query: 241 IIPLYEKMGVKVHTAI-TGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIP--S 297
           +  L + +G++V+     G + V++  +  R++ N+V         A  +E K+G P   
Sbjct: 205 LKRLLQGIGLRVNVLFGPGSAGVSEWRAIPRAQFNLVLSPWLGLATAQHLENKFGQPYLH 264

Query: 298 IKVNFFGLDETTKSLRAVAEFFGDEE-----MIKRTEELIKSEIKNLRDEISEYKKDLSG 352
           + V   G  +T++ LR VA F G  +      I   E      I+   +  S+Y+  L  
Sbjct: 265 LPVPPIGGRQTSEFLRQVAAFAGIPDAQAGAFIAAEERDYYGYIEAFSEFYSQYRWGLPA 324

Query: 353 RTVAIYSGAHKSWALVSAFGELDMEIIMSG---TQNGKPEDYQQIR 395
           R  AI  G   +   +S+F    + ++ +    T N  PE    IR
Sbjct: 325 RFAAI--GDAATTLSISSFAVRQLGLVPAVVVITDNTPPEHRDAIR 368