Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 462 a.a., V-containing nitrogenase subunit beta from Rhodopseudomonas palustris CGA009

 Score = 57.8 bits (138), Expect = 8e-13
 Identities = 87/406 (21%), Positives = 174/406 (42%), Gaps = 54/406 (13%)

Query: 74  CVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIVFG 133
           C   GA+   + + D + LVHG  G   CT  +R   +   K   +  ST L E   VFG
Sbjct: 20  CQPAGAQYAGIGVKDCIPLVHGGQG---CTMFVRLLFAQHFKENFDIASTSLHEDSAVFG 76

Query: 134 GEKKLYESILEVNKLY-HPGAIFVYSTCVVGLIGDDLKAVCRQAQEA-------TGCRVI 185
           G +++ + +L + + Y     I V +TC   +IGDD++    +A  A           V+
Sbjct: 77  GHQRIIDGVLTLARRYPELRVIPVITTCSTEIIGDDIEGNIGKANAALKKEFPGRKIHVV 136

Query: 186 PVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGDLWGIIPLY 245
           PV +  FK+ ++  G+     A++  +    + +      +N+   +   GD+  +   +
Sbjct: 137 PVHTPSFKA-SQVGGYAECMQAIIKTIC---DHKVAPTGKLNVFPGWVNPGDVVLLKHYF 192

Query: 246 EKMGV-------------------KVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLA 286
            +MGV                    +HT   G +TV  +  A  +  ++   +      A
Sbjct: 193 NEMGVDATIFMDTEDFDSPMLPDKSIHT--HGRTTVEDIKHASGAIASLALAKYEGGSTA 250

Query: 287 AQMEKKYGIPSIKVNF-FGLDETTKSLRAVAEFFGDEEMIKRTEELIKSE---IKNLRDE 342
             ++ ++ +PS  V+  +G+  T   L+ ++E  G        + L+K     +  L+D 
Sbjct: 251 DYLKTEFEVPSHLVSTPYGIANTDAMLKRISEITGK----PIPDSLVKERGIALDALQDL 306

Query: 343 ISEYKKDLSGRTVAIYSGAHKSWALVSAFGELDME--IIMSGTQNGKPEDYQQI--RDHV 398
              +  D   + VA++        L     E++M+  +++ G  N + +   +I    + 
Sbjct: 307 AHMFFAD---KKVALFGHPDLVIGLAEFCLEVEMKPVLMLLGDDNSRYKKDPRILALKNK 363

Query: 399 CEGTL-IVDDASSMELVQ--LLKEYKPDILISGAKEKYLSLKSGIP 441
           C   + +V +A   EL +  L K+Y  D+++  +K +Y+++ + IP
Sbjct: 364 CNWDMEVVCNADLWELEKRALDKDYGIDLIMGHSKGRYVAIDANIP 409