Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 472 a.a., nitrogenase vanadium-iron protein, alpha chain from Rhodopseudomonas palustris CGA009

 Score =  254 bits (650), Expect = 3e-72
 Identities = 138/436 (31%), Positives = 249/436 (57%), Gaps = 10/436 (2%)

Query: 50  VSGKD--DSIPTCDKNSTPGMITQRSCVYGGARVVLMPIT-DAVHLVHGPIGCAACTWDI 106
           V G+D  D +P  +  + PG +++R C + GA++V+  +  D + ++HGPIGCA  TW  
Sbjct: 23  VDGEDTRDYLPVSNAPTIPGTLSERGCAFCGAKLVIGGVLKDTIQMIHGPIGCAYDTWHT 82

Query: 107 RGSKS-TGDKLYKNGFSTDLQEKDIVFGGEKKLYESILEV-NKLYHPGAIFVYSTCVVGL 164
           +   S  G    K  +STD++E  IVFGG+K+L +SI E  +++ H   + VY+TC   L
Sbjct: 83  KRYPSDNGHFQMKYVWSTDMKESHIVFGGDKRLEKSIHEAFDEMPHIKRMIVYTTCPTAL 142

Query: 165 IGDDLKAVCRQAQEAT-GCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHP 223
           IGDD+KA  ++  E      +   +  GF   +++ GH +     ++  +GT EPE   P
Sbjct: 143 IGDDIKATVKRVMEVRPDVDIFTCECPGFAGVSQSKGHHVLNIGWVNEKVGTVEPEITSP 202

Query: 224 YSINIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSN 283
           Y+IN IG++N+ GD   +   ++K+G++V    TG++    + + HR++LN+V C +S+ 
Sbjct: 203 YTINFIGDYNIQGDTQLLQQYWDKLGIQVIAHFTGNANYDDLRAMHRAQLNVVNCARSAG 262

Query: 284 YLAAQMEKKYGIPSIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEI 343
           Y+A +++K+YGIP + ++ +G +   + +R V  FFG EE   + E LI  E    + ++
Sbjct: 263 YIANELKKRYGIPRLDIDSWGFNYMAEGIRKVCAFFGIEE---KGEALIAEEYAKWKPQL 319

Query: 344 SEYKKDLSGRTVAIYSGAHKSWALV-SAFGELDMEIIMSGTQNGKPEDYQQIRDHVCEGT 402
             YK+ L G  +AI++G  + W    S   +L ++++   ++ G  ED++++      GT
Sbjct: 320 DWYKERLKGTKMAIWTGGPRLWHWTKSVEDDLGVQVVAMSSKFGHQEDFEKVIARGQSGT 379

Query: 403 LIVDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINF 462
             VDD + +E  +++   KPD++ +G +   L  K  IP+ + +      + G++GF+N 
Sbjct: 380 YYVDDGNELEFFEIIDLVKPDVIFTGPRVGELVKKLHIPYVNGHAYHNGPYMGFEGFVNL 439

Query: 463 ARVVHTAVMTPIWRLS 478
           AR ++ AV  P+ +L+
Sbjct: 440 ARDMYNAVHNPLLKLA 455