Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 54.7 bits (130), Expect = 8e-12
 Identities = 92/416 (22%), Positives = 159/416 (38%), Gaps = 60/416 (14%)

Query: 74  CVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIVFG 133
           C   GA +    +  AV  +HG  GCA     +R    +  +   +  S+ L EK  V+G
Sbjct: 84  CTPLGAMLAFRGVEGAVPFLHGSQGCATY---MRRYVISHYREPMDIASSSLGEKQAVYG 140

Query: 134 GEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATGCRVIP-VQSEGF 192
           G   L + IL V K Y P  + V +TC+   IGDD+    R+ +   G   +P +     
Sbjct: 141 GGPNLKKGILNVMKKYDPVLVGVATTCLTETIGDDVGGYLREFRNEFGDLDLPEIVHVHT 200

Query: 193 KSFNKT--AGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGDLWGIIPLYEKMG- 249
            S+N T   G   A  A++D +    +  E H   + ++  F    DL  +  L    G 
Sbjct: 201 PSYNGTHLEGWHAAVRALVDQL--ARDRVEPHG-KVALLPGFVSPADLRHLRDLITDFGS 257

Query: 250 ----------------VKVHTAITGDSTVAKVASAHRSKLNIVQCQKS------------ 281
                           ++ +T +    T      A      +++C +S            
Sbjct: 258 DAVILPDLSDPLDGPALEDYTPLPEGGTPLADIRALSGAAGVIECGRSLAMTPTGSSGSS 317

Query: 282 ----SNYLAAQ------MEKKYGIPSIKVNF-FGLDETTKSLRAVAEFFGDEEMIKRTEE 330
               S+  A        +++++G+P   V    GL ET   + A+    G  + +    E
Sbjct: 318 GSSGSSGSAGPATAGRVLDERFGLPLHAVGLPIGLRETDALVSALEAITG--KPLPHKHE 375

Query: 331 LIKSEIKNLRDEISEYKKDLSGRTVAIYSGAHKSWALVSAFGELDMEIIMSGTQNGKPED 390
           L   E     D + +  K +SG+   +Y  A     LVS   E+ +  +++ T       
Sbjct: 376 L---ERGRFVDALVDGHKYVSGKRAVVYGEADLVIGLVSLLTEIGVHTVLAATGMRGAHL 432

Query: 391 YQQIRDHVCEGTL-----IVDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIP 441
            + I   V EG L     +++ A   E+    +   PD+L+  +K    + +  IP
Sbjct: 433 AESIA-AVTEGMLPAMPTVIEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIP 487