Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 458 a.a., nitrogenase molybdenum-iron protein beta chain (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 99/426 (23%), Positives = 172/426 (40%), Gaps = 53/426 (12%)

Query: 72  RSCVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFS---TDLQEK 128
           ++C   GA    + I   +   HG  GC A        +ST  + YK   S   +   E 
Sbjct: 22  KTCQPIGAMYAGLGIKGCLPHSHGSQGCCAY------HRSTLTRHYKEPVSAATSSFTEG 75

Query: 129 DIVFGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAV----CRQAQEATGCRV 184
             VFGG+  L ++I  +  +Y P  I V++TC+   IGDDL  +     ++ +   G +V
Sbjct: 76  ASVFGGQANLLQAIENIFSVYEPEIIAVHTTCLSETIGDDLNQIVDKAVKEGKVPDGKQV 135

Query: 185 IPVQSEGF-----KSFNKTAGHKLACDAM--------LDYVIGTEEPE--EEHPYSINII 229
           I   +  +       F+      + C A+        ++ + G  EP   EE      +I
Sbjct: 136 IFASTPSYVGSHVTGFSNMVKGMVKCLAVSSGKKNGKVNIIPGWVEPADMEEIKRIAGMI 195

Query: 230 G-EFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQ 288
           G  F +  D  G+  L   +  + H      +    + +A  +   +   +  S   A  
Sbjct: 196 GVSFTMFPDTSGV--LNGPLTGEYHMFPDAGTPAEDIRAAGDAIGTLALGEWCSADAART 253

Query: 289 MEKKYGIPSIKVNF-FGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYK 347
           ++ +  +P   ++   GL  T + + A+    G         + +  E   L D IS+Y 
Sbjct: 254 LDSQCKVPCRVLDMPIGLKATDRFIDALRVVAGTS-----VPDTVNFERGQLIDVISDYH 308

Query: 348 KDLSGRTVAIYSGAHKSWALVSAFGELDME--IIMSGTQNGKPEDYQQIRDHVCEG---T 402
           +   G+ VA+     +  AL      LDM+   +++GT   K E   +IR+ +C G    
Sbjct: 309 QYFFGKKVALVGDPDQLIALTEFLLTLDMQPVHVVTGTPGKKFE--ARIRE-LCAGKGFD 365

Query: 403 LIVDDASSMELV-QLLKEYKPDILISGAKEKYLSLKSGIPHCDFNH---DRI----TAFS 454
           + V  A  M L+ Q +K    D+++     KY+     IP+  F     DR+       +
Sbjct: 366 VNVRAAGDMFLLHQWIKNEPVDLIMGNTYCKYIVRDEDIPYVRFGFPIMDRVGHQYFPVT 425

Query: 455 GYQGFI 460
           GY+G I
Sbjct: 426 GYKGGI 431