Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis JJ

 Score =  299 bits (766), Expect = 1e-85
 Identities = 152/433 (35%), Positives = 256/433 (59%), Gaps = 18/433 (4%)

Query: 60  CDKNSTPGMITQRSCVYGGAR-VVLMPITDAVHLVHGPIGCAAC------TWDIRGSKST 112
           C+ N+ PG +T+R C + G + V+   I D +H+VH P+GC +        +  R     
Sbjct: 35  CNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHVVHSPVGCTSYGNGTTKRYPTRPEMPD 94

Query: 113 GDKLYKNGFS------TDLQEKDIVFGGEKKLYESILEVNKLY-HPGAIFVYSTCVVGLI 165
           G       F+      TDL E D+VFGG KKL  +I E  K Y    AI+VY+TC  GLI
Sbjct: 95  GSVFPVENFNLKHIVGTDLTESDVVFGGMKKLKTTIREAAKEYPFVNAIYVYATCTTGLI 154

Query: 166 GDDLKAVCRQAQEATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYS 225
           GDDL AVC++ Q   G  V+   + GF    ++ GH +    + + ++GT+EP +   Y 
Sbjct: 155 GDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKEPPKTTDYD 214

Query: 226 INIIGEFNVAGDLWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYL 285
           IN+IGE+N+ GD W +   ++ MG+ V +  TGD+T  ++   H++KL++V+CQ+S+ Y+
Sbjct: 215 INLIGEYNIDGDYWVLEKYFDDMGINVLSKFTGDATHGELCWMHKAKLSLVRCQRSATYV 274

Query: 286 AAQMEKKYGIPSIKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISE 345
           A  +E+KYG+P +KV+FFG +   ++LRAV ++FG E      E +IK E++ ++ E+  
Sbjct: 275 AKLIEEKYGVPYLKVDFFGPEYCAENLRAVGKYFGKE---IEAEAVIKKEMEKIQPELDF 331

Query: 346 YKKDLSGRTVAIYSGAHKSWALVSAFGE-LDMEIIMSGTQNGKPEDYQQIRDHVCEGTLI 404
           YK  L G+ + I +G  KSW L     + L M+++         + Y+++++   +GT+I
Sbjct: 332 YKSKLQGKKIWISAGGPKSWHLSKPIEQYLGMDVVALSGLFEHEDGYEKMQERAKDGTII 391

Query: 405 VDDASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFAR 464
           +DD +++E+ +++++Y+P+I++ G KEKY   K G+P    +      + G++GF+N AR
Sbjct: 392 IDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHKLGVPSVMIHSYENGPYIGFEGFVNMAR 451

Query: 465 VVHTAVMTPIWRL 477
            ++TA+  P W+L
Sbjct: 452 DIYTAIYNPAWKL 464