Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 461 a.a., nitrogenase molybdenum-iron protein beta chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 52.8 bits (125), Expect = 3e-11
 Identities = 73/311 (23%), Positives = 131/311 (42%), Gaps = 36/311 (11%)

Query: 72  RSCVYGGARVVLMPITDAVHLVHGPIGCAACTWDIRGSKSTGDKLYKNGFSTDLQEKDIV 131
           ++C   GA    + I   +   HG  GC  C++  R   +   +      ++   E   V
Sbjct: 21  KTCQPIGAMYAALGIHGCLPHSHGSQGC--CSYH-RSHLTRHFREPVMASTSSFTEGASV 77

Query: 132 FGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQE----ATGCRVIPV 187
           FGG   L +++  + ++Y P  + V++TC+   IGDD+  + + A E      G +VI  
Sbjct: 78  FGGGPNLRQALKTIFQVYDPDMVAVHTTCLSETIGDDIPTITKVAMEDGTVPQGKKVIHC 137

Query: 188 QSEGFKSFNKTAGHKLACDAMLDYV-IGTEEPEEEHPYSINIIGEFNVAGDLWGIIPLYE 246
            +  +   + T G     + M++Y+  GT    ++    +N+I  F    D+  I  +  
Sbjct: 138 NTPSYVGSHVT-GFSNMVEGMVNYLAAGT---GKQAAGQVNVIPGFVEPSDMRKIKGMLA 193

Query: 247 KMGVK----------VHTAITGD--------STVAKVASAHRSKLNIVQCQKSSNYLAAQ 288
           +MGV           + T  TG+        +T A  A +  S   +     +S   A  
Sbjct: 194 QMGVDGVVFPDTSDVLDTPQTGEYRMYPAGGTTQADFARSGDSMATLALGAWASEAGAKA 253

Query: 289 MEKKYGIPSIKVNF-FGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYK 347
           +EKK G+P   ++   G+  T + L A+ E  G           +K E   L D +++Y+
Sbjct: 254 LEKKCGVPYRLLDTPIGVLATDRFLAALQETTG-----MTVPRSLKDERGKLVDMMTDYQ 308

Query: 348 KDLSGRTVAIY 358
             L G+ VA +
Sbjct: 309 SLLFGKRVAAW 319