Pairwise Alignments

Query, 480 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Methanococcus maripaludis S2

Subject, 542 a.a., nitrogenase molybdenum-iron protein alpha chain (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  302 bits (773), Expect = 2e-86
 Identities = 164/475 (34%), Positives = 257/475 (54%), Gaps = 61/475 (12%)

Query: 64  STPGMITQRSCVYGGAR-VVLMPITDAVHLVHGPIGCAACTW-----DIRGSKSTGDKLY 117
           + PG+ITQR C Y G + VV+ P  D VH+VHGP+GC+   W       R     G    
Sbjct: 55  TVPGIITQRGCCYAGCKGVVIGPYGDMVHIVHGPVGCSFYAWLTRRNQFRARGEAGKNYL 114

Query: 118 KNGFSTDLQEKDIVFGGEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQ 177
              F+TD+Q++DI+FGGEKKL ++I E   ++ P AI V++TC VGLIGDD++AV R+  
Sbjct: 115 SYCFTTDMQDEDIIFGGEKKLAQAIREAAAIFRPEAISVHATCPVGLIGDDIQAVARELS 174

Query: 178 EATGCRVIPVQSEGFKSFNKTAGHKLACDAMLDYVIGTEEPEEEHPYSINIIGEFNVAGD 237
           + TG  V+    EG+K  +++AGH +A + + D  +GT E E    +S+N++GE+N+ GD
Sbjct: 175 KETGIPVMAFNCEGYKGVSQSAGHHIANNKIFDMALGTREREAGR-FSVNVLGEYNIGGD 233

Query: 238 LWGIIPLYEKMGVKVHTAITGDSTVAKVASAHRSKLNIVQCQKSSNYLAAQMEKKYGIPS 297
            + I  + EK G++V    +G+S    + +AH + LN+V C +S NYLA  ME K+GIP 
Sbjct: 234 AYEIERVLEKCGIEVVATFSGNSVYEDMCTAHSANLNLVMCHRSINYLAEMMETKFGIPW 293

Query: 298 IKVNFFGLDETTKSLRAVAEFFGDEEMIKRTEELIKSEIKNLRDEISEYKKDLSGRTVAI 357
           +KVNF G+   ++SLR +A +F D  +  R E +I  E       ++ Y   L G+T  +
Sbjct: 294 MKVNFIGMRSMSQSLRKIARYFDDAALTARIESVIAEEEARAETALAAYMPGLEGKTAML 353

Query: 358 YSGAHKSWALVSAFGELDMEIIMSGTQNGKPEDYQQIR---------------------- 395
           + G  ++   +    +L ME +++G +    +DY+  R                      
Sbjct: 354 FVGGSRAHHYMHLMRDLGMEPLVAGFEFAHRDDYEGRRVIPTIRVDADSKNIEELKVTAD 413

Query: 396 -----------------------------DHVCEGTLIVDDASSMELVQLLKEYKPDILI 426
                                        D + EGTL++DD S +E+ +L+    PDI+ 
Sbjct: 414 PERYRPRLDPAYREQLEREGLLSSYEGMWDDMGEGTLVIDDVSHVEIEKLIHRMNPDIIC 473

Query: 427 SGAKEKYLSLKSGIPHCD--FNHDRITAFSGYQGFINFARVVHTAVMTPIWRLSR 479
           SG K+KY+  K G+P C    N+D    ++GY+G +NFAR V+  + +P W+L+R
Sbjct: 474 SGIKDKYVIEKFGVP-CKQLHNYDYSGPYAGYEGAVNFARDVYAMIHSPAWKLTR 527