Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 513 a.a., NifK nitrogenase molybdenum-iron protein beta chain from Sinorhizobium meliloti 1021

 Score =  286 bits (731), Expect = 1e-81
 Identities = 169/466 (36%), Positives = 253/466 (54%), Gaps = 24/466 (5%)

Query: 3   ELNVIKKERTAVINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPA 62
           E+N+ ++    V+NP   CQPLGA++A +G ER M  VHGSQGC  + R   +RHF+EP+
Sbjct: 54  EINLARE--ALVVNPAKACQPLGAVFAAAGFERTMSFVHGSQGCVAYYRSHLSRHFKEPS 111

Query: 63  DIAVTSLHEDAAVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKV 122
               +S+ EDAAVFGG KN++ GL N    + P ++ V TTC +E+IGDD+ GFI+ AK 
Sbjct: 112 SAVSSSMTEDAAVFGGLKNMVDGLANTYKLYDPKMIAVSTTCMAEVIGDDLHGFIENAKD 171

Query: 123 EIAKKMGEEAANKIKIVQINTPSFVEHQFKGYDNAIKAIVDTL--AEPKDEENGKLNIIP 180
           E A        +   +   +TP+FV     GYD+ +K +++     E +    G +NIIP
Sbjct: 172 EGA------VPHDFDVPFAHTPAFVGSHVDGYDSMVKGVLENFWKGEQRTVNPGSINIIP 225

Query: 181 GIVN--PGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQ 238
           G      G+ RE+K +L+LMGV    + D SD FD+P     +D       GGT + D++
Sbjct: 226 GFDGFCVGNNRELKRLLNLMGVSYTFIQDASDQFDTP-----SDGEFRMYDGGTKIEDVR 280

Query: 239 DCANSLGTISLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDE 298
              N+  T+SL  Y         K     +     P+G++ TD F+  V + +G ++ + 
Sbjct: 281 AALNAEATVSLQQYNTRRTLEYCKAAGQSTVSFHYPLGVKATDEFLVKVSEISGREIPEA 340

Query: 299 ILDERGIVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYF 358
           I  ERG ++DAMAD  S +L G+K AIYGDP     +ARF+ E G  P           +
Sbjct: 341 IRLERGRLVDAMADSQS-WLHGKKYAIYGDPDFVYAVARFIMETGGEPTHCLATNGTPAW 399

Query: 359 VNDLKKVAKES--DEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRV 416
             ++K +   S    D      +DL A+   L   PVDL+IG+S G+ + +D G PL R+
Sbjct: 400 EAEMKMLLASSPLGNDAQVWASKDLWAMRSLLFTEPVDLLIGNSYGKYLERDTGTPLIRL 459

Query: 417 GYPVYDRVGYQRRPIIGYNGALNLVDGITNTILDKYYETQDWKLQQ 462
            +P++DR  + R P++GY G L     +  TILDK ++  D +  Q
Sbjct: 460 MFPIFDRHHHHRFPLMGYQGGLR----VLTTILDKIFDRLDRETMQ 501