Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 487 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Rhodopseudomonas palustris CGA009

 Score = 54.7 bits (130), Expect = 7e-12
 Identities = 88/415 (21%), Positives = 159/415 (38%), Gaps = 76/415 (18%)

Query: 25  GAMYAVSGIERGMPLVHGSQGC--------------STFVRYGFARHFREPADIAVTSLH 70
           GA  A+  I     LVHG   C              S   R GF            T + 
Sbjct: 49  GAKIALQPIVDVAHLVHGPIACEGSSWDNRGTKSSGSKLYRTGFT-----------TDMG 97

Query: 71  EDAAVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGE 130
           E+  +FGG K L   +  +  ++ P  + V  TC   ++GDD+    K A  +  K    
Sbjct: 98  ENDVIFGGEKRLFRSIREIIEKYDPPAVFVYQTCVPAMMGDDIVAVCKVASEKFGK---- 153

Query: 131 EAANKIKIVQINTPSFVEHQFKGYDNAIKAIVDTL---AEPKDEENGKLNIIPGIVNPGD 187
                   V I +P FV  +  G   A +A++D +    EP+      +NII      G+
Sbjct: 154 ------PCVPIISPGFVGPKNLGNKLAGEAMLDYVIGTQEPEFTTPYDINIIGEYNVAGE 207

Query: 188 IREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSLGTI 247
           + ++K +L  +G+  +        +    +  +A             A +  C+ ++  +
Sbjct: 208 LWQVKPLLDELGIRILSCLSGDARYHEVAQSHRA------------RAAMMVCSTAMINV 255

Query: 248 SLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKK-FTGNDVTDEILDERGIV 306
           +           +E++Y +P     +  GI +T   +R + +        DE++     +
Sbjct: 256 A---------RKMEERYGIP-YFEGSFYGISDTSESLRQIARLLIARGAPDELMARTEAL 305

Query: 307 I---DAMADVASR----YLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFV 359
           I   +A A  A +     L G+KV +      +  +   + E G+   +V T VK     
Sbjct: 306 IAREEAKAWAAIKAYTPRLEGKKVLLITGGVKSWSVVAALQEAGL--SIVGTSVKKSTKE 363

Query: 360 NDLKKVAKESDEDIDALFGQDLRALDVY--LKENPVDLMIGSSDGRLMAKDLGIP 412
           + L+   KE   D+  +   DLR  ++Y  LK+   D+M+     + +A    +P
Sbjct: 364 DKLR--LKEMSPDVHQI--DDLRPREMYKMLKDAQADIMLSGGRSQFVALKARMP 414