Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 457 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifN from Rhodopseudomonas palustris CGA009

 Score =  202 bits (513), Expect = 2e-56
 Identities = 134/449 (29%), Positives = 223/449 (49%), Gaps = 28/449 (6%)

Query: 6   VIKKERTAVINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIA 65
           ++   ++  +NP+   QPLGA  A  G+   MPL+HGSQGC++F    F RHFRE   + 
Sbjct: 4   IVTSTKSCTVNPLRMSQPLGAALAFMGLRNCMPLLHGSQGCTSFGLVLFVRHFRESIPLQ 63

Query: 66  VTSLHEDAAVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIA 125
            T++ E A V GG +N+   + N+  R KPDV+G+ TT  +EI GDD+ G+IK  +    
Sbjct: 64  TTAMSEVATVLGGFENVEQAIVNIVGRTKPDVIGICTTGVTEIKGDDLDGYIKMVRAN-- 121

Query: 126 KKMGEEAANKIKIVQINTPSFVEHQFKGYDNAIKAIVDTLAEPKDE----ENGKLNIIPG 181
                E AN + +V ++TP F      G+   +  IV+TL E   E    +  ++N++ G
Sbjct: 122 ---HPELAN-VALVPVSTPDFKGAFEDGFAATVTRIVETLVETPAEGAAPDADRINVLAG 177

Query: 182 I-VNPGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDC 240
             + PGDI E++ ++   G+    L D S   D  +     D       GG  +A++   
Sbjct: 178 SHLTPGDIDELRDIIEAFGLVPTFLPDISGSLDGHV----PDDFTPTTHGGVSVAEVVAM 233

Query: 241 ANSLGTISLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEIL 300
             +  T++   +   A A+LE K  +P  +     G+   D  + T+ K +G  V  +  
Sbjct: 234 GGAGHTLAFGEHMRKAAAALEAKAGVPFTLLSRVTGLAAADELMATLAKISGRPVPPKYR 293

Query: 301 DERGIVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFVN 360
            +R  ++DAM D    Y  G+ VAI  +P + + +  ++A++G       T   +     
Sbjct: 294 RQRSQLVDAMLD-GHFYFGGKSVAIGAEPDMLLNIGGWLADMGCTVSAAVTTTTSP---- 348

Query: 361 DLKKVAKESDEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPV 420
            L +V  +     + L G DL   D+  +    DL++  S GR  A+ L +PL+R+G P+
Sbjct: 349 SLAQVPSD-----EVLIG-DLE--DLERRAEDCDLLVTHSHGRQAAERLSVPLFRMGLPM 400

Query: 421 YDRVGYQRRPIIGYNGALNLVDGITNTIL 449
           +DR+G   +  +GY G  +L+  I N  +
Sbjct: 401 FDRLGAVHQVAVGYRGTRDLIFAIGNLFI 429