Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 472 a.a., nitrogenase vanadium-iron protein, alpha chain from Rhodopseudomonas palustris CGA009

 Score = 49.3 bits (116), Expect = 3e-10
 Identities = 104/460 (22%), Positives = 164/460 (35%), Gaps = 93/460 (20%)

Query: 21  CQPLGAMYAVSGIERG-MPLVHGSQGCSTFVRYGFARHFREPAD--------IAVTSLHE 71
           C   GA   + G+ +  + ++HG  GC+    Y      R P+D        +  T + E
Sbjct: 49  CAFCGAKLVIGGVLKDTIQMIHGPIGCA----YDTWHTKRYPSDNGHFQMKYVWSTDMKE 104

Query: 72  DAAVFGGRKNLISGLGNLAARFKPDV--MGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMG 129
              VFGG K L   +   A    P +  M V TTC + +IGDD+   +K           
Sbjct: 105 SHIVFGGDKRLEKSIHE-AFDEMPHIKRMIVYTTCPTALIGDDIKATVKRVM-------- 155

Query: 130 EEAANKIKIVQINTPSFV-EHQFKGYD----NAIKAIVDTLAEPKDEENGKLNIIPGIVN 184
            E    + I     P F    Q KG+       +   V T+ EP+      +N I     
Sbjct: 156 -EVRPDVDIFTCECPGFAGVSQSKGHHVLNIGWVNEKVGTV-EPEITSPYTINFIGDYNI 213

Query: 185 PGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSL 244
            GD + ++     +G++ I     +  +D      +A  N            + +CA S 
Sbjct: 214 QGDTQLLQQYWDKLGIQVIAHFTGNANYDDLRAMHRAQLN------------VVNCARSA 261

Query: 245 GTISLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDE-ILDER 303
           G I+           L+K+Y +P ++     G       IR V  F G +   E ++ E 
Sbjct: 262 GYIA---------NELKKRYGIP-RLDIDSWGFNYMAEGIRKVCAFFGIEEKGEALIAEE 311

Query: 304 GIVIDAMADVASRYLFGRKVAIY-GDPSI--------------TVGMARFVAELGMIPKV 348
                   D     L G K+AI+ G P +               V M+          KV
Sbjct: 312 YAKWKPQLDWYKERLKGTKMAIWTGGPRLWHWTKSVEDDLGVQVVAMSSKFGHQEDFEKV 371

Query: 349 VCTGVKNEYFVNDLKKVAKESDEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKD 408
           +  G    Y+V+D                G +L   ++     P  +  G   G L+ K 
Sbjct: 372 IARGQSGTYYVDD----------------GNELEFFEIIDLVKPDVIFTGPRVGELV-KK 414

Query: 409 LGIPLYRVGYPVYDRVGYQRRPIIGYNGALNLVDGITNTI 448
           L IP Y  G+       Y   P +G+ G +NL   + N +
Sbjct: 415 LHIP-YVNGH------AYHNGPYMGFEGFVNLARDMYNAV 447