Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 460 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifN from Rhodopseudomonas palustris CGA009

 Score =  165 bits (418), Expect = 3e-45
 Identities = 118/461 (25%), Positives = 211/461 (45%), Gaps = 25/461 (5%)

Query: 1   MSELNVIKKERTAVINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFRE 60
           M+EL  +   +   +NP+  CQP+GA  A  G+   +PL HG++GC++F +  F RHF E
Sbjct: 1   MAEL--LAPTKPLAVNPLKACQPIGASLAFLGLADCLPLEHGARGCTSFNKLFFMRHFNE 58

Query: 61  PADIAVTSLHEDAAVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTA 120
           P  +  T++ +   V G   N+I  L  +  R KP V+G+++T  S + G D+   I   
Sbjct: 59  PIALQTTAMDQITTVIGADSNVIEALATICERDKPKVIGLISTGLSSMQGADLPRTI--- 115

Query: 121 KVEIAKKMGEEAANKIKIVQINTPSFVEHQFKGYDNAIKAIVDTLAEPKDEEN--GKLNI 178
            VE   K+ E A   +K++       +     G+  A++AI++ +A  +       ++N+
Sbjct: 116 -VEFYAKLPEYA--DVKVIAAAATDTLGCLESGFALAVEAIIEAVAPGRSSVRLPRQVNV 172

Query: 179 I-PGIVNPGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADL 237
           +   ++ PGD+  IK  +   G+  I+L D +D  D  L  +      Y   GGT L D+
Sbjct: 173 LASAMLTPGDVEAIKAWIEAYGLTPIVLPDIADSLDGHLIDAGFSTLTY---GGTTLDDI 229

Query: 238 QDCANSLGTISLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTD 297
              + S  T+ +    + A   L ++  +P    ++ +G+  +D+F   +       +  
Sbjct: 230 GRMSQSAATLVIGRSLDRAADRLRERTGVPDHRFDSLMGLDASDAFSGALGSIANCAMPA 289

Query: 298 EILDERGIVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEY 357
           +I  +R   +DAM D   + + G +VAI  D  +   +  F  E+G          K   
Sbjct: 290 KIARKRAQFLDAMVDTQFQ-IGGARVAIAADAGLCAALVSFFTEMGAEVIAAVAAAKAPQ 348

Query: 358 FVNDLKKVAKESDEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVG 417
             N            +D++   DL  L+    +   DL++ +S G  +AK  G  L R G
Sbjct: 349 LAN----------LPLDSVVIGDLEDLEWLASDRGADLIVTNSHGADIAKRTGAALLRAG 398

Query: 418 YPVYDRVGYQRRPIIGYNGALNLVDGITNTILDKYYETQDW 458
           +P+YD  G      IGY G    +  I + +   +++ + +
Sbjct: 399 FPIYDSYGAYAESFIGYGGGRRTLFRIADLLAANFHDLRPY 439