Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 538 a.a., Nitrogenase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  263 bits (673), Expect = 8e-75
 Identities = 147/459 (32%), Positives = 252/459 (54%), Gaps = 34/459 (7%)

Query: 16  NPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTSLHEDAAV 75
           N    C PLGAM A  G+E  +P +HGSQGC+T++R     H+REP DIA +SL E  AV
Sbjct: 79  NACKLCTPLGAMLAFRGVEGAVPFLHGSQGCATYMRRYVISHYREPMDIASSSLGEKQAV 138

Query: 76  FGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEAANK 135
           +GG  NL  G+ N+  ++ P ++GV TTC +E IGDDV G+++    E   + G+   + 
Sbjct: 139 YGGGPNLKKGILNVMKKYDPVLVGVATTCLTETIGDDVGGYLR----EFRNEFGD--LDL 192

Query: 136 IKIVQINTPSFVEHQFKGYDNAIKAIVDTLAEPKDEENGKLNIIPGIVNPGDIREIKHML 195
            +IV ++TPS+     +G+  A++A+VD LA  + E +GK+ ++PG V+P D+R ++ ++
Sbjct: 193 PEIVHVHTPSYNGTHLEGWHAAVRALVDQLARDRVEPHGKVALLPGFVSPADLRHLRDLI 252

Query: 196 SLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSLGTI-------- 247
           +  G + ++L D SDP D    P+  D  P   +GGTPLAD++  + + G I        
Sbjct: 253 TDFGSDAVILPDLSDPLDG---PALEDYTP-LPEGGTPLADIRALSGAAGVIECGRSLAM 308

Query: 248 ----------SLANYANSAPAS----LEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGN 293
                     S  +  ++ PA+    L++++ +P      PIG++ TD+ +  ++  TG 
Sbjct: 309 TPTGSSGSSGSSGSSGSAGPATAGRVLDERFGLPLHAVGLPIGLRETDALVSALEAITGK 368

Query: 294 DVTDEILDERGIVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGV 353
            +  +   ERG  +DA+ D   +Y+ G++  +YG+  + +G+   + E+G+   +  TG+
Sbjct: 369 PLPHKHELERGRFVDALVD-GHKYVSGKRAVVYGEADLVIGLVSLLTEIGVHTVLAATGM 427

Query: 354 KNEYFVNDLKKVAKESDEDIDALF-GQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIP 412
           +  +    +  V +     +  +  G D   +    +    DL++G+S G   A+   IP
Sbjct: 428 RGAHLAESIAAVTEGMLPAMPTVIEGADFEEIADTAEGLSPDLLVGNSKGYRYARQWNIP 487

Query: 413 LYRVGYPVYDRVGYQRRPIIGYNGALNLVDGITNTILDK 451
           L R G+P++DR G  R   +GY GA  L+D I N +++K
Sbjct: 488 LVRAGFPIHDRFGGHRLLHVGYAGAQALMDRIVNAVIEK 526