Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 458 a.a., nitrogenase from Methanococcus maripaludis JJ

 Score =  387 bits (993), Expect = e-112
 Identities = 203/454 (44%), Positives = 291/454 (64%), Gaps = 14/454 (3%)

Query: 9   KERTAVINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTS 68
           +++ AVINP   CQP+GA++A+ G++  MPL+HGS GCST++R+   RHF+E  ++A +S
Sbjct: 3   EKKFAVINPCKICQPMGAIFALMGVKNSMPLIHGSHGCSTYMRFQLGRHFKEAVNVASSS 62

Query: 69  LHEDAAVFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKM 128
           + E  AV GG +NL   + N++  + P+++GV T+C SE IGDDV G I+  K +     
Sbjct: 63  MSEANAVLGGEENLKHAIRNVSRIYGPEIIGVTTSCLSETIGDDVEGIIRLFKTQ----- 117

Query: 129 GEEAANKIKIVQINTPSFVEHQFKGYDNAIKAIVDTLAEPKDEENGKLNIIPGIVNPGDI 188
                +  +IV I+TPS+     +GYD+ +KA+V+ LA P  + N KLN+I G+V+PGDI
Sbjct: 118 ---NDDLPEIVPISTPSYKHTHVEGYDSTVKALVENLATPS-KPNSKLNVITGMVSPGDI 173

Query: 189 REIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSLGTIS 248
            E K +L  MG+E I+LTDTS+  D+P     +    +    GT + +L+D ANS  TIS
Sbjct: 174 AETKRILREMGIESIILTDTSESMDAPFDGEVS----FVSSAGTTVEELKDTANSFATIS 229

Query: 249 LANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDERGIVID 308
           L  +ANSA   L + Y + S     PIG+Q+TD F+  + K T  ++ ++I  ERG +ID
Sbjct: 230 LCKHANSAAKFLHEAYGIKSVSPYLPIGLQSTDEFMNELCKLTNKEIPEQITRERGKLID 289

Query: 309 AMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFVNDLKKVAKE 368
           AM D A ++ FGRKVAIYGDP + VG  RFV ELGMIP +VCTG +++ FV D+K V K+
Sbjct: 290 AMID-AHQHNFGRKVAIYGDPDVVVGFTRFVLELGMIPSIVCTGSESKTFVEDIKAVTKD 348

Query: 369 SDEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPVYDRVGYQR 428
           S      L   DL  L   +K++ VDL+IG+S G  +A    IPL R+G+P+YDRVG QR
Sbjct: 349 SKHKPVILAPGDLYDLHQEIKKSKVDLLIGNSYGSRIAGAENIPLIRMGFPIYDRVGAQR 408

Query: 429 RPIIGYNGALNLVDGITNTILDKYYETQDWKLQQ 462
              +GY   + LVD ITNTILD+Y++   W L +
Sbjct: 409 ITSLGYTAGIRLVDTITNTILDRYFDEFGWALDE 442