Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 519 a.a., nitrogenase molybdenum-iron protein beta chain from Herbaspirillum seropedicae SmR1

 Score =  262 bits (670), Expect = 2e-74
 Identities = 156/455 (34%), Positives = 246/455 (54%), Gaps = 28/455 (6%)

Query: 15  INPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTSLHEDAA 74
           INP   CQPLGA+YA  G +  +P VHGSQGC  + R  F+RHF+EP     +S+ EDAA
Sbjct: 64  INPAKACQPLGAVYAAVGFQNTLPFVHGSQGCVAYYRSHFSRHFKEPTSCVSSSMTEDAA 123

Query: 75  VFGGRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEAAN 134
           VFGG  N+I GL N  + +KP+++ V TTC +E+IGDD+  FIK      AK  G   A 
Sbjct: 124 VFGGLNNMIDGLANALSLYKPEMIAVSTTCMAEVIGDDLDSFIKN-----AKDKGSVPA- 177

Query: 135 KIKIVQINTPSFVEHQFKGYDNAIKAIV--------DTLAEPKDEENGKLNIIPGIVN-- 184
           +  +   +TP+FV     GYDNA+K I+         T+   + + N ++N I G     
Sbjct: 178 EYDVPFAHTPAFVGSHVTGYDNALKGILTHFWDGKAGTVPALERKPNERINFIGGFDGFV 237

Query: 185 PGDIREIKHMLSLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSL 244
            G++ E+K +  LMGV+G ++ D S+ +++P      D       GGT   ++ +  ++ 
Sbjct: 238 VGNLPEVKRIFKLMGVDGTIVCDPSEVWNTP-----TDGQFRMYSGGTTKQEVIEALDAK 292

Query: 245 GTISLANYANSAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDERG 304
            T+    ++    A    +          P+G+  TD F+  + + +G  +  E+  ERG
Sbjct: 293 ATVVFQEFSTLKTAKYIAEKGQEVVTLNHPMGVAGTDQFLMELSRLSGQPIPAELELERG 352

Query: 305 IVIDAMADVASRYLFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFVNDLKK 364
            ++DA+AD +  +L G+K A+YGDP + +GM +F+ ELG  P  + +   +  +   ++ 
Sbjct: 353 RLVDAIAD-SQAHLHGKKFALYGDPDMMIGMTQFLLELGCEPTHILSTNGDAEWAAKVQA 411

Query: 365 V--AKESDEDIDALFGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPVYD 422
           +  A    +D      +DL  L   L   PVD +IG++ G+ + +D G+PL R+ +PV+D
Sbjct: 412 LLDASPFGKDCKVYPKRDLWHLRSLLFTEPVDFLIGNTYGKYLERDCGVPLIRLVFPVFD 471

Query: 423 RVGYQRRPIIGYNGALNLVDGITNTILDKYYETQD 457
           R  Y R PI GY GA+     +   ILD+Y+E  D
Sbjct: 472 RHHYHRFPIWGYAGAMR----VLVMILDEYFEALD 502