Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 89/400 (22%), Positives = 148/400 (37%), Gaps = 41/400 (10%)

Query: 21  CQPLGAMYAVSGIERGMPLVHGSQGCSTF---VRYGFARHFREPADIAVTSLHEDAAVFG 77
           C   G+   +  I   + LVHG  GC+ +   +R   +           T L E   +FG
Sbjct: 56  CVFCGSRVVLYPIADALHLVHGPVGCAAYTWDIRGALSSGPELHRLSFSTDLGERDIIFG 115

Query: 78  GRKNLISGLGNLAARFKPDVMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEAANKIK 137
           G   L + L  L  R  P    V  TC   +IGDD+    K     +A + G      I 
Sbjct: 116 GEPKLEAALDELITRHAPKAAFVYATCIVGLIGDDIGAVCK----RVAARHG------IP 165

Query: 138 IVQINTPSFVEHQFKGYDNAIKAIVDTLAEPKDEENG--KLNIIPGIVNPGDIREIKHML 195
           ++ + +  F  ++ +GY+ A  A+         +  G   +NI+      G++  I+  L
Sbjct: 166 VLPVQSEGFKGNKREGYEAACAAMFTLTGTGATDGIGPASVNILGDFNLAGELWIIRGYL 225

Query: 196 SLMGVEGILLTDTSDPFDSPLRPSKADKNPYYQKGGT-PLADLQDCANSLGTISLANYAN 254
             MGV+ +         D   R   A  N     G T PLA +     + GT +L     
Sbjct: 226 ERMGVQVVANITGDGRVDDLRRCHGAALNLVQCSGATMPLARMM--REAYGTPTLRVSYL 283

Query: 255 SAPASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDERGIVIDAMADVA 314
                 +  YN+     E   GI                + T +++ E    +       
Sbjct: 284 GIEDMADSLYNVAEHFREVCPGIV---------------ERTRDLVREEIATLMPRLRQL 328

Query: 315 SRYLFGRKVAIY-GDPSITVGMARFVAELGMIPKVVCTGVKNEYFVNDLKKVAKESDEDI 373
            R L G++ AIY G       + +    LGM   +V +    +    +L+ +      D 
Sbjct: 329 RRDLEGKRAAIYVGGAFKAFSLIKAFRHLGMQVALVGSQTGTDEDYRELEAIC-----DP 383

Query: 374 DALFGQDLRALDV--YLKENPVDLMIGSSDGRLMAKDLGI 411
             +   D  AL++  +++   VD+ +G    R +A  LGI
Sbjct: 384 GTIIVDDANALELAHFVRTLDVDIFVGGVKERPIAHKLGI 423