Pairwise Alignments

Query, 462 a.a., nitrogenase molybdenum-iron protein subunit beta from Methanococcus maripaludis S2

Subject, 504 a.a., nitrogenase molybdenum-iron cofactor biosynthesis protein NifN, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  195 bits (496), Expect = 3e-54
 Identities = 133/496 (26%), Positives = 228/496 (45%), Gaps = 58/496 (11%)

Query: 9   KERTAVINPIVTCQPLGAMYAVSGIERGMPLVHGSQGCSTFVRYGFARHFREPADIAVTS 68
           +   A  N    C PLGA  A  GIE  +P +HGSQGC+T++R     H+REP DIA ++
Sbjct: 4   RNHIATTNACKLCTPLGATLAFRGIEGAVPFLHGSQGCATYMRRYVISHYREPMDIASSA 63

Query: 69  LHEDAAVFGGRKNLISGLGNLAARFKP--------------------------------D 96
           L E  A+ GG  NL  GL N+  ++ P                                D
Sbjct: 64  LGEKHAIHGGGPNLKKGLLNVMKKYHPRLVGVATTCLTETIGDDVGRILREFRNEFGDLD 123

Query: 97  VMGVVTTCSSEIIGDDVAGFIKTAKVEIAKKMGEEAANKIKIVQINTPSFV----EHQF- 151
           +  +V   +    G  + G+    +  + +++ E     +      T S V     H+  
Sbjct: 124 LPDIVHVSTPSFAGTHMDGWYDAVRA-VTEQLVESTPGAMSGTMSGTMSGVISGAPHEAA 182

Query: 152 -----KGYDNAIKAIVDTL------AEPKDEENGKLNIIPGIVNPGDIREIKHMLSLMGV 200
                +G   A   + DT               G+  ++PG+++P DIR ++ ++   G+
Sbjct: 183 PGAAARGPATAGATVSDTTPGAISGTTSGTVSTGRTCLLPGLLSPADIRHLRDVMEAFGL 242

Query: 201 EGILLTDTSDPFDSPLRPSKADKNPYYQKGGTPLADLQDCANSLGTISLANYANSAP--- 257
             ++L D S+  D+P   + A        GGTPL D++    +   + + +   S P   
Sbjct: 243 APVILPDISETLDAPCLEAYAP----IPAGGTPLDDIRALGRARAVVEMGDPLGSRPSAG 298

Query: 258 ASLEKKYNMPSKVSEAPIGIQNTDSFIRTVKKFTGNDVTDEILDERGIVIDAMADVASRY 317
           A+L  ++ +P      P+G++ TD+F+  +++ +G  +   ++ ERG ++DA+ D   +Y
Sbjct: 299 AALHARHGVPLFRVGVPVGLRETDTFMEALERISGTAMPPRMMLERGRLVDALVD-GHKY 357

Query: 318 LFGRKVAIYGDPSITVGMARFVAELGMIPKVVCTGVKNEYFVNDLKKVAKESDEDI-DAL 376
           + G++  +YGD  +  G+   +AE G+ P +V TG +       +  V      D+ +  
Sbjct: 358 VAGKRAVVYGDADMVTGLCAMLAETGIRPVLVATGARGCGLAARVAAVCGGLMPDLPEVR 417

Query: 377 FGQDLRALDVYLKENPVDLMIGSSDGRLMAKDLGIPLYRVGYPVYDRVGYQRRPIIGYNG 436
            G D   +         DL++G+S G   A+  GIPL R G+PV+DR G QR   +GY G
Sbjct: 418 EGVDFHEIAERAGTLAPDLLVGNSKGYRYARAWGIPLVRTGFPVHDRFGGQRLLHVGYTG 477

Query: 437 ALNLVDGITNTILDKY 452
           AL L D I N +++++
Sbjct: 478 ALALYDRIVNALIERH 493