Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 482 a.a., Nitrogenase MoFe cofactor biosynthesis protein NifE (NCBI) from Rhodospirillum rubrum S1H

 Score =  208 bits (530), Expect = 3e-58
 Identities = 135/455 (29%), Positives = 229/455 (50%), Gaps = 33/455 (7%)

Query: 22  KDSKEPKGHCKQRCNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHVVHSPVGCTAYGNG 81
           K+  +  G  K+ C T  +       GCAF G K +    + DV+H+VH P+ C   GN 
Sbjct: 17  KNRGKTAGERKKGCGTKGLTPGAAAGGCAFDGAK-IALQPVTDVVHLVHGPIACE--GNS 73

Query: 82  TTKRYPTRPEMPDGSVFPVENFNLKHIVGTDLTESDVVFGGMNKLKKVIREASKEFPFVN 141
               + TR     G +     F       TDL+E DV+ GG  KL + I+EA  ++    
Sbjct: 74  ----WDTRNVGTSGPLIYRWGFT------TDLSEMDVIHGGEKKLYRAIKEAVAKYA-PP 122

Query: 142 AIYVYATCTTGLIGDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKL 201
           AI+VY TC   LIGDD+D VCK     LG  VV  NAPGF G +++ G+ +G   +   +
Sbjct: 123 AIFVYQTCVPALIGDDIDQVCKVASERLGLPVVPVNAPGFVG-SKNLGNKLGAEALLAHV 181

Query: 202 VGTKEPPKTTDYDINLIGEYNIDGDYWVLEKYFEDMGINVLSKFTGDATHGELCWMHKAK 261
           +GT EP      DIN+IGEYN+ G++ +++  F+++GI + +  TG++ + +L   H A+
Sbjct: 182 IGTIEPSDAGPTDINIIGEYNVAGEFALVKPLFDELGIRIRACITGNSRYRDLAGAHTAR 241

Query: 262 LSLVRCQRSATYVAKLIEEKYGVPYLKVDFFGPEYCAENLRAVGKYFGKE-------IEA 314
           ++++ C ++   + + + E++G+PY +  F+G    ++ LR +     +           
Sbjct: 242 VNMMVCSQAMINLGRGMRERWGIPYFEGSFYGIGDTSQTLRTIATLLVERGATADLIART 301

Query: 315 EAVIKKEMEKIQPELDFYKSKLQGKKIWISAGGPKSWHLSKPIEQYLGMDVVALSGLFEH 374
           EA+I +E  K    +  Y+ +L GK++ +  GG KSW +   +++ +GM+VV  S     
Sbjct: 302 EALIAREEAKAWAAMAAYRPRLAGKRVLLYTGGVKSWSVVHALQE-MGMEVVGTSVRKST 360

Query: 375 EDGYEKM-----QERAKDGTII--IDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHKLGV 427
           ED   +      Q   K G +   I +P   EM  +    + +I+L G + ++   K   
Sbjct: 361 EDDKARARAALDQNTGKVGELFGAIANP---EMYRMFRDGEADIMLSGGRSQFVALKART 417

Query: 428 PSVMIHSYENGPYIGFEGFVNMARDIYTAIYNPAW 462
             + I+   +  Y G++G + + R +   I NP W
Sbjct: 418 AWMDINQERHHGYAGYDGMLELVRQMDIEINNPVW 452