Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 511 a.a., Nitrogenase (NCBI) from Rhodospirillum rubrum S1H

 Score =  132 bits (333), Expect = 2e-35
 Identities = 107/416 (25%), Positives = 202/416 (48%), Gaps = 48/416 (11%)

Query: 60  GAIKDVLHVVHSPVGCTA--------YGNGTTKRYPTRPEMPDGSVFPVENFNLKHIVGT 111
           G ++  + V HSP+GC A        + NG   R             PVEN    H++ T
Sbjct: 76  GNVRGAVLVQHSPIGCGAGQVIYNSIFRNGLAIRG-----------LPVENL---HLIST 121

Query: 112 DLTESDVVFGGMNKLKKVIREA-SKEFPFVNAIYVYATCTTGLIGDDLDAVCKEMQAELG 170
           +L E D+V+GG++KL++ IR+A  +  P   AI++  +C T +IGDD+++V  +++AE G
Sbjct: 122 NLRERDMVYGGLDKLERTIRDAWERHHP--QAIFIATSCPTAIIGDDIESVASQLEAEFG 179

Query: 171 KDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKEPPKTTDYDINLIGEYNIDGDYWVL 230
             V+  +  GF     S G     + I  ++V  K P +  +  +N+I  +  D    V 
Sbjct: 180 IPVIPLHCEGFKSKHWSTGFDATQHGILRQIV-RKNPERKQEDLVNVINLWGSD----VF 234

Query: 231 EKYFEDMGINVLSKFTGDATHGELCWMHKAKLSLVRCQRSATYVAKLIEEKYGVPYLKVD 290
                ++G+ V +     AT  +L  M +A  ++  C   +TY+A  +E+++GVP +K  
Sbjct: 235 GPMLGELGLRV-NYVVDLATVEDLAQMSEAAATVGFCYTLSTYMAAALEQEFGVPEVKAP 293

Query: 291 F-FGPEYCAENLRAVGKYFGKEIEAEAVIKKEMEKIQPELDFYKSKLQGKKIWISAGGPK 349
             +G       LR + +   +E +AEA I +E  +++P+L+  + KL+G K ++S G   
Sbjct: 294 MPYGFAGTDAWLREIARVTHREEQAEAYIAREHARVKPQLEALREKLKGIKGFVSTGSAY 353

Query: 350 SWHLSKPIEQYLGMDVVALSGLFEHEDGYEKMQERAKDGTIIIDDPNTLEMEEVVEKYQP 409
           +  + + + + LG+ V   S +F H+  Y+    R      ++D+   +    V  + Q 
Sbjct: 354 AHGMIQVLRE-LGVTVDG-SLVFHHDPVYDSQDPRQDSLAHLVDNYGDVGHFSVGNRQQF 411

Query: 410 EI--VLGGIKEKYFF----------HKLGVPSVMIHSYENGPYIGFEGFVNMARDI 453
           +   +L  +K  +             +LG+P++ +   +    +G++G +N+   I
Sbjct: 412 QFYGLLQRVKPDFIIIRHNGLAPLASRLGIPAIPLG--DEHIAVGYQGILNLGESI 465