Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 441 a.a., Oxidoreductase/nitrogenase, component 1 (NCBI) from Rhodospirillum rubrum S1H

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 74/281 (26%), Positives = 115/281 (40%), Gaps = 28/281 (9%)

Query: 49  CAFAGVKGVITGAIKDVLHVVHSPVGCTAYGN-GTTKRYPTRPEMPDGSVFPVENFNLKH 107
           CA  G + V   AI+  + +VH+  GC    + G ++    +     G            
Sbjct: 12  CALGGQQSVC--AIERAIPIVHAGPGCAIKLHCGLSEANGYQGSGYSGGAA--------- 60

Query: 108 IVGTDLTESDVVFGGMNKLKKVIREASKEFPFVNAIYVYATCTTGLIGDDLDAVCKEMQA 167
           +V T+  E +VVFGG   L+KVI  A K     +   V   CT+ LIGDD   V  E +A
Sbjct: 61  VVSTNSGEREVVFGGEESLRKVIAGALKVMD-GDLFVVLTGCTSELIGDDSARVVAEFRA 119

Query: 168 ELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKEPPKTTDYDINLIGEYNIDGDY 227
           + G  +V     GF G +   GH      I ++L+     P+T    +N+         +
Sbjct: 120 K-GAPIVHAATGGFRG-SNLLGHDTVAKAIIDQLL--DPAPQTVPGLVNVWASVPYQDPF 175

Query: 228 W-----VLEKYFEDMGINVLSKFTGDATHGELCW--MHKAKLSLVRCQRSATYVAKLIEE 280
           W      +      +G+ V   F G  + G   W  +  A+ +LV    +    A+ +E+
Sbjct: 176 WRGNLQAIRALLASLGLTVNILF-GPGSGGLAAWKQIPAAQFNLVLSSWTGLAPAQALEK 234

Query: 281 KYGVPYLKVDF--FGPEYCAENLRAVGKYFG-KEIEAEAVI 318
           ++G P+L       G       LRAV  + G     AE VI
Sbjct: 235 RFGTPWLHYPVLPIGALETGRFLRAVAAFAGLAPARAETVI 275