Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 457 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Rahnella sp. WP5

 Score =  197 bits (500), Expect = 8e-55
 Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 29/444 (6%)

Query: 32  KQRCNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHVVHSPVGCTAYGNGTTKRYPTRPE 91
           KQ+   +      T  GCAF G +  +   + DV H+VH P+GCT         +  R  
Sbjct: 20  KQKSGCSLPKPGATAGGCAFDGAQIALL-PVADVAHLVHGPIGCTG------SSWDNRGS 72

Query: 92  MPDGSVFPVENFNLKHIVGTDLTESDVVFG-GMNKLKKVIREASKEFPFVNAIYVYATCT 150
              G       F       TD++E DV+ G G  +L   ++     +  V A+++Y TC 
Sbjct: 73  RSSGPSINRMGFT------TDMSEQDVIMGRGERRLFHAVQHIVSHYHPV-AVFIYNTCV 125

Query: 151 TGLIGDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKEP--- 207
             + GDD++AVC+   A  G  V++ +A GF G +++ G+ +    + +K++G +EP   
Sbjct: 126 PAMEGDDVEAVCRAASAAAGVPVISVDAAGFYG-SKNLGNRIAGDVMVKKVIGQREPASW 184

Query: 208 ------PKTTDYDINLIGEYNIDGDYWVLEKYFEDMGINVLSKFTGDATHGELCWMHKAK 261
                 P    + I+LIGE+NI G++W +    +++GI VL   +GD+   E+  MH+ +
Sbjct: 185 PENSPIPAGHRHSISLIGEFNIAGEFWHVLPLLDELGIRVLCSLSGDSRFAEIQTMHRGE 244

Query: 262 LSLVRCQRSATYVAKLIEEKYGVPYLKVDFFGPEYCAENLRAVG---KYFGKEIEAEAVI 318
            +++ C R+   VA+ +EE+Y +P+ +  F+G    A++LR +    K    +   E +I
Sbjct: 245 ANMLVCSRALINVARKMEERYQIPWFEGSFYGLRSIADSLRTIAVLLKDPDLQARTERLI 304

Query: 319 KKEMEKIQPELDFYKSKLQGKKIWISAGGPKSWHLSKPIEQYLGMDVVALSGLFEHEDGY 378
           ++E       L  Y+++L G+K  +  GG KSW +   + Q LG+ VVA       E+  
Sbjct: 305 EREEAATHLALAPYRTRLSGRKALLYTGGVKSWSVVSAL-QDLGITVVATGTRKSTEEDK 363

Query: 379 EKMQERAKDGTIIIDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHKLGVPSVMIHSYENG 438
           ++++E   +  ++ D+ N   + + + ++  +I++ G +  Y  +K  +P + I+     
Sbjct: 364 QRIRELMGEDVLMFDEGNARTLLDTLYRFGGDIMIAGGRNMYTAYKARLPFLDINQEREH 423

Query: 439 PYIGFEGFVNMARDIYTAIYNPAW 462
            + G+ G VN+A  +   + +P W
Sbjct: 424 AFAGYHGLVNLAEQLCITLESPVW 447