Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 480 a.a., nitrogenase molybdenum-iron protein alpha chain from Dechlorosoma suillum PS

 Score =  340 bits (873), Expect = 5e-98
 Identities = 180/461 (39%), Positives = 274/461 (59%), Gaps = 16/461 (3%)

Query: 9   DKDIPEREQHIYIKDSKEPKGHCKQRCNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHV 68
           +K   +R +H+ + +  +P   C  + N  ++PG MT RGCA+AG KGV+ G IKD++H+
Sbjct: 24  EKAAKKRAKHLNVYEEGKPD--CGVKSNIKSLPGVMTIRGCAYAGSKGVVWGPIKDMVHI 81

Query: 69  VHSPVGCTAYGNGTTKRYPTRPEMPDGSVFPVENFNLKHIVGTDLTESDVVFGGMNKLKK 128
            H PVGC  Y  GT + Y +      G+V  V+NF +  +  +D  E D+VFGG  KL K
Sbjct: 82  SHGPVGCGQYSWGTRRNYAS------GTV-GVDNFTVLQVT-SDFQEKDIVFGGDKKLDK 133

Query: 129 VIREASKEFPFVNAIYVYATCTTGLIGDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSK 188
           VI E ++ FP    I + + C  GLIGDD++AV K+   E+ K +V     GF G +QS 
Sbjct: 134 VIDEITEIFPLARGISIQSECPIGLIGDDIEAVAKKKTKEISKTIVPVRCEGFRGVSQSL 193

Query: 189 GHHVGNYTIFEKLVGTKEPP--KTTDYDINLIGEYNIDGDYWVLEKYFEDMGINVLSKFT 246
           GHH+ N  + + ++   +    ++T YD+ +IG+YNI GD W      E+MG+ V+++++
Sbjct: 194 GHHIANDMVRDWVLDKADNKGFESTPYDVTIIGDYNIGGDAWSSRILLEEMGLRVIAQWS 253

Query: 247 GDATHGELCWMHKAKLSLVRCQRSATYVAKLIEEKYGVPYLKVDFFGPEYCAENLRAVGK 306
           GD T  E+    KAKL+L+ C RS  Y+++ +EEKYG+P+++ +FFGP   A +LR +  
Sbjct: 254 GDGTLAEMEKTPKAKLNLLHCYRSMNYISRHMEEKYGIPWVEYNFFGPSKIAASLREIAS 313

Query: 307 YFGKEIE--AEAVIKKEMEKIQPELDFYKSKLQGKKIWISAGGPKSWHLSKPIEQYLGMD 364
           +F   I+  AE VI K    +   +  YK +L GKK+ +  GG +  H+    E  LGM+
Sbjct: 314 HFDDTIKENAEKVIAKYQAMVDGIIAKYKPRLTGKKVMLYVGGLRPRHVVGAYED-LGME 372

Query: 365 VVALSGLFEHEDGYEKMQERAKDGTIIIDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHK 424
           VV     F H D Y++     KDGT+I DD    E E+  EK +P++V  G+KEKY F K
Sbjct: 373 VVGAGYEFAHGDDYQRTTHYVKDGTLIYDDVTGFEFEKFAEKIRPDLVGSGVKEKYIFQK 432

Query: 425 LGVPSVMIHSYE-NGPYIGFEGFVNMARDIYTAIYNPAWKL 464
           +G+P   +HS++ +GPY G++GF   ARD+  AI +P W +
Sbjct: 433 MGIPFRQMHSWDYSGPYHGYDGFAIFARDMDMAINSPVWSM 473