Pairwise Alignments

Query, 477 a.a., nitrogenase subunit alpha from Methanococcus maripaludis S2

Subject, 568 a.a., nitrogenase MoFe cofactor biosynthesis protein NifE domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  235 bits (600), Expect = 3e-66
 Identities = 143/437 (32%), Positives = 230/437 (52%), Gaps = 27/437 (6%)

Query: 35  CNTNTIPGSMTERGCAFAGVKGVITGAIKDVLHVVHSPVGCTAYGNGTTKRYPTRPEMPD 94
           CN  ++ G++++R C F G + V+   I D LH+VH PVGC AY         + PE+  
Sbjct: 42  CNRESLAGAVSQRACVFCGSR-VVLYPIADALHLVHGPVGCAAYTWDIRGALSSGPELHR 100

Query: 95  GSVFPVENFNLKHIVGTDLTESDVVFGGMNKLKKVIREA-SKEFPFVNAIYVYATCTTGL 153
            S              TDL E D++FGG  KL+  + E  ++  P   A +VYATC  GL
Sbjct: 101 LSF------------STDLGERDIIFGGEPKLEAALDELITRHAP--KAAFVYATCIVGL 146

Query: 154 IGDDLDAVCKEMQAELGKDVVAFNAPGFAGPTQSKGHHVGNYTIFEKLVGTKEPPKTTDY 213
           IGDD+ AVCK + A  G  V+   + GF G  + +G+      +F  L GT         
Sbjct: 147 IGDDIGAVCKRVAARHGIPVLPVQSEGFKG-NKREGYEAACAAMFT-LTGTGATDGIGPA 204

Query: 214 DINLIGEYNIDGDYWVLEKYFEDMGINVLSKFTGDATHGELCWMHKAKLSLVRCQRSATY 273
            +N++G++N+ G+ W++  Y E MG+ V++  TGD    +L   H A L+LV+C  +   
Sbjct: 205 SVNILGDFNLAGELWIIRGYLERMGVQVVANITGDGRVDDLRRCHGAALNLVQCSGATMP 264

Query: 274 VAKLIEEKYGVPYLKVDFFGPEYCAENLRAVGKYF-----GKEIEAEAVIKKEMEKIQPE 328
           +A+++ E YG P L+V + G E  A++L  V ++F     G       ++++E+  + P 
Sbjct: 265 LARMMREAYGTPTLRVSYLGIEDMADSLYNVAEHFREVCPGIVERTRDLVREEIATLMPR 324

Query: 329 LDFYKSKLQGKKIWISAGGP-KSWHLSKPIEQYLGMDVVALSGLFEHEDGYEKMQERAKD 387
           L   +  L+GK+  I  GG  K++ L K   ++LGM V  +      ++ Y +++     
Sbjct: 325 LRQLRRDLEGKRAAIYVGGAFKAFSLIKAF-RHLGMQVALVGSQTGTDEDYRELEAICDP 383

Query: 388 GTIIIDDPNTLEMEEVVEKYQPEIVLGGIKEKYFFHKLGVPSVMIHSYENG-PYIGFEGF 446
           GTII+DD N LE+   V     +I +GG+KE+   HKLG+     H++E      GFEG 
Sbjct: 384 GTIIVDDANALELAHFVRTLDVDIFVGGVKERPIAHKLGI-GFCDHNHERKIALAGFEGM 442

Query: 447 VNMARDIYTAIYNPAWK 463
            N AR+++ ++ +P W+
Sbjct: 443 YNFAREVHASVTSPVWR 459