Pairwise Alignments

Query, 275 a.a., nitrogenase iron protein from Methanococcus maripaludis S2

Subject, 295 a.a., Nitrogenase iron protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  318 bits (815), Expect = 9e-92
 Identities = 158/275 (57%), Positives = 206/275 (74%), Gaps = 4/275 (1%)

Query: 2   VRKIAIYGKGGIGKSTTTQNTVAAMAHFHDKKVFIHGCDPKADSTRLILHGKQQVTMMDT 61
           +R+IA YGKGGIGKSTT+QNT+AA+     +++ I GCDPKADSTRLIL+ K Q T++  
Sbjct: 4   LRQIAFYGKGGIGKSTTSQNTLAALVEM-GQRILIVGCDPKADSTRLILNTKLQDTVLHL 62

Query: 62  LREKGE-DECTPDKVIEVGFGGVKCVESGGPEPGVGCAGRGVITAITLMEQHGVYEDDLD 120
             E G  ++     V+++G+ G+KC ESGGPEPGVGCAGRGVITAI  +E++G Y DDLD
Sbjct: 63  AAEAGSVEDLDVADVVKIGYKGIKCTESGGPEPGVGCAGRGVITAINFLEENGAY-DDLD 121

Query: 121 FVFFDVLGDVVCGGFAMPVRDGKADEIYVVASGEMMALYAANNICKGMVKYAEQSGVRLG 180
           +V +DVLGDVVCGGFAMP+R+ KA EIY+V SGEMMALYAANNI KG++KYA   GVRLG
Sbjct: 122 YVSYDVLGDVVCGGFAMPIRENKAQEIYIVMSGEMMALYAANNIAKGILKYAHTGGVRLG 181

Query: 181 GIICNSRNVDGELDLLQEFCDKIGTQLIHFVPRDNIVQKAEFQKKAVVDYDDTCNQALEY 240
           G+ICN R  D E++L +    ++G +LIHFVPRDN VQ AE +++ V+ Y     QA EY
Sbjct: 182 GLICNERQTDKEVELAEALAGRLGCRLIHFVPRDNGVQHAELRRQTVIQYAPDSKQAGEY 241

Query: 241 KELARKIIENENL-VIPTPMTMDELEELTSKYGFL 274
           + LA KI  N    V+PTP+TM++LEE+  ++G +
Sbjct: 242 RTLATKIHNNSGQGVVPTPITMEDLEEMLMEFGIM 276