Pairwise Alignments

Query, 275 a.a., nitrogenase iron protein from Methanococcus maripaludis S2

Subject, 291 a.a., Nitrogenase iron protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (642), Expect = 1e-71
 Identities = 127/270 (47%), Positives = 180/270 (66%), Gaps = 4/270 (1%)

Query: 3   RKIAIYGKGGIGKSTTTQNTVAAMAHFHDKKVFIHGCDPKADSTRLILHGKQQVTMMDTL 62
           ++IAIYGKGGIGKSTTT N  AA+A     KV   GCDPK+DST  +  G    +++D L
Sbjct: 6   KQIAIYGKGGIGKSTTTSNISAALAEA-GYKVMQFGCDPKSDSTNTLRGGDYIPSVLDLL 64

Query: 63  REKGEDECTPDKVIEVGFGGVKCVESGGPEPGVGCAGRGVITAITLMEQHGVYED-DLDF 121
           RE    +    + I  GFGG+ CVE+GGP PGVGCAGRG+ITA+ L++Q  V+E+ DLD+
Sbjct: 65  RENARVDA--HEAIFQGFGGIYCVEAGGPAPGVGCAGRGIITAVELLKQQNVFEELDLDY 122

Query: 122 VFFDVLGDVVCGGFAMPVRDGKADEIYVVASGEMMALYAANNICKGMVKYAEQSGVRLGG 181
           V FDVLGDVVCGGFA+P+R+G A+ ++ V+S + MA+YAANN+ KG+ KY+   G  LGG
Sbjct: 123 VIFDVLGDVVCGGFAVPIREGIAEHVFTVSSSDFMAIYAANNLFKGIQKYSNAGGALLGG 182

Query: 182 IICNSRNVDGELDLLQEFCDKIGTQLIHFVPRDNIVQKAEFQKKAVVDYDDTCNQALEYK 241
           +I NS N D   D++ +F  +  TQ++ +VPR   V +AE Q +  ++      QA  Y+
Sbjct: 183 VIANSINTDFHRDIIDDFVARTQTQVVQYVPRSLTVTQAELQGRTTIEAAPESAQAEIYR 242

Query: 242 ELARKIIENENLVIPTPMTMDELEELTSKY 271
            LAR I ++ +  +PTP+   EL + ++ +
Sbjct: 243 TLARSIADHTDSKVPTPLNAQELRDWSASW 272