Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 435 a.a., amino acid permease from Rhodanobacter denitrificans FW104-10B01

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 95/376 (25%), Positives = 181/376 (48%), Gaps = 41/376 (10%)

Query: 3   SKKLGPYTLSGLIVGPILGSGIVIIP----PIVYDILKDYSIFAWVIMMTIGGVFAYFAS 58
           SKK+G +T + L+VG ++G GI ++P    P  ++ L  ++I   +  +T+  VF++ A 
Sbjct: 4   SKKIGFWTCTALVVGNVIGIGIFLLPASLAPYGFNALIGWTI-TLLGCLTLARVFSHLAH 62

Query: 59  KLCLKFPGDSGLTEVVGHSFGK--SYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLF--- 113
            L    P   G    +  + G+  +Y  L AY++ + +  A L   +V   Y++V+F   
Sbjct: 63  AL----PNAEGPYGYIRSTLGELPAYMALWAYWVSLWLTNAALATGVVG--YITVVFPAL 116

Query: 114 -----SNYAFGAEFYSAVLMLIGGVILSRNISSVGKISMLISTVISTILVVGGLFTILFY 168
                + +A G   +S V++ + GV    ++  V     L+  +   I ++GG   +   
Sbjct: 117 NVIQPALFALGL-LWSLVIINLFGVRTGGSVQIVTTALKLLPML--AIALLGGWVLLTSP 173

Query: 169 RKDALFT-GTGISTIDVGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMS 227
                    T ++  DV  +  I  ++++G E     +  VENP +TIP+A +   +  +
Sbjct: 174 ASYVAHPPATPVTLHDVMAASTIALFAMLGIESASVPAARVENPGRTIPRATMTGTVLTA 233

Query: 228 IVYLIVSGALQVLDIGKLGLIDPISGISLILYPLFGQYSS---IILSLTITGL-CLCSFL 283
           I+Y+IVS  + +L I +  L +  +  SL++   FG   S   + L + ++GL  L  + 
Sbjct: 234 IIYIIVS-TVPLLLIRQQELANASAPFSLLM-ERFGSAGSGRWLALFVVVSGLGALNGWT 291

Query: 284 MLIGGASRLVYAQAKDGVFPKIFKYRSNTNAPLSAVLLMVFANFLTLFAVYFNLISFNEI 343
           +L+G  +R     A +GV P  F   +  +AP  AV L+V     ++       +S+++ 
Sbjct: 292 LLVGELTR---TMAVNGVLPAPFARTNRRDAP--AVALIVTGALASVMV----WMSYSKS 342

Query: 344 IAAVNAFLITNIIMAA 359
           + +   F IT ++ AA
Sbjct: 343 LVSAFTF-ITRVVTAA 357