Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 439 a.a., putrescine-ornithine antiporter from Vibrio cholerae E7946 ATCC 55056

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 95/428 (22%), Positives = 190/428 (44%), Gaps = 29/428 (6%)

Query: 2   SSKKLGPYTLSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLC 61
           S+ K+G   L+ L +  ++GSGI+++P  +  +    SI +W++        A+  +K  
Sbjct: 4   SNNKIGVVQLTILTIVNMMGSGIIMLPTQLAQV-GTISILSWLVTAAGSTALAFAFAKCG 62

Query: 62  LKFPGDSGLTEVVGHSFGKSYKNLNAYYLLIAMAMAPLVVIMVAGEYLSVLFSNYAFGAE 121
           +      G+     ++FG+S   +  Y   +++ +A + + + A  Y  VLF  +    E
Sbjct: 63  MFSKKSGGMGGYAEYAFGRSGNFMANYTYAVSLLIANVAIAISAVGYADVLFGFHLTPIE 122

Query: 122 FYSAVLMLI--------GGVILSRNISSVGKISMLISTVISTILVVGGLFTILFYRKDAL 173
              A ++++        GG  ++  +SSV    ++I  VI   ++    F    YR  A 
Sbjct: 123 TCIATILVLWVATVANFGGARITGQVSSVTVWGIIIP-VIGVSIIGWYWFDFDLYR--AA 179

Query: 174 FTGTGISTID-VGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMSIVYLI 232
           +   G+     +G S  +  W+ +G E     +  VENPEK +P A +   +  +++Y+I
Sbjct: 180 WNPHGLPFFQALGGSIAMTLWAFLGLESACANADAVENPEKNVPIAVMGGTLGAAVIYII 239

Query: 233 VSGALQVLDIGKLGLIDPISGISLILYPLFGQYSSIILSLTITGLCLCSFLMLIGGASRL 292
            +  +  + +    L +  +   L    +F      I+       C  S L      +++
Sbjct: 240 STNVIAGI-VPNADLANSNAPFGLAFAQMFNPTMGAIVMACAIVSCTGSLLGWQFTIAQV 298

Query: 293 VYAQAKDGVFPKIFKYRSNTNAPLSAVLLMV-FANFLTLFAVYFNLISFNEIIAAVNAFL 351
             A A +G FPK+F   +  +AP+  +L +V   + L+L  +  +L    +  A VN  +
Sbjct: 299 FKASADEGFFPKLFSKVTKADAPVLGMLTIVSIQSVLSLMTISPSL--NKQFEALVNLAV 356

Query: 352 ITNII--MAAVASIKVFENVMEKGFA----------VFLLVSFLLMFLFSSKMVILIILA 399
           +TNII  + ++A++ V +  +    +          +  + SF  ++      V+L  +A
Sbjct: 357 VTNIIPYILSMAALGVMQKQLNVPVSQAKVANVMAFIGAMYSFYALYSSGETAVMLGSIA 416

Query: 400 MLFGTVVY 407
             FG V+Y
Sbjct: 417 TFFGWVLY 424