Pairwise Alignments

Query, 417 a.a., APC family permease from Methanococcus maripaludis S2

Subject, 437 a.a., amino acid/polyamine/organocation transporter, APC superfamily from Pseudomonas syringae pv. syringae B728a

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 80/377 (21%), Positives = 161/377 (42%), Gaps = 39/377 (10%)

Query: 11  LSGLIVGPILGSGIVIIPPIVYDILKDYSIFAWVIMMTIGGVFAYFASKLCLKFPGDSGL 70
           L+  I+G +LG+G+  +   +   +        +I +    + A   ++L  K+P   G 
Sbjct: 18  LTLFILGDVLGAGVYALAGTIAGRVGGAIWAPLLIALCFALLTAASYAELVTKYPRAGGA 77

Query: 71  TEVVGHSFGKSYKNLNAYYLLIAMAM--APLVVIMVAGEYLSVLFSNYAFGAEFYSAVLM 128
                 +FGK   +    + ++A  +  A  + +  AG+Y   L     + A++     +
Sbjct: 78  AVYAEKAFGKPLLSFLVGFSMVAAGVTSAAGLAVAFAGDYFQALLD---WPAQWVCVAFL 134

Query: 129 LIGGVILSRNISSVGKISMLISTVISTILVVGGLFTILFYRKDALFTGTGI--------- 179
           +  G++ +R I        L + ++ T++ + GL  ++      +  G G+         
Sbjct: 135 VTVGLLNARGIKE-----SLSANLVMTVIELSGLLMVIAAAIWFVSQGQGVPQRVFELDS 189

Query: 180 ---STIDVGYSFLIMFWSIIGWEILGNYSLEVENPEKTIPKAALVSVIAMSIVYLIVS-G 235
              +T  +G S L+ F+S +G+E   N + E+++  K  P+A   +++A   VY++V  G
Sbjct: 190 ASPATAILGAS-LLAFYSFVGFETSANLAEEIKDVRKVYPRALFGALLAAGAVYILVGMG 248

Query: 236 ALQVLDIGKL-----GLIDPISGISL-ILYPLFGQYSSIILSLTITGLCLCSFLMLIGGA 289
           A  VL + +L      L+D +S   L I  P F    ++I  + +    L + +M    A
Sbjct: 249 AAMVLPVEQLKDSQAPLMDVVSASGLGIPAPWF----AVIALIAVANGALLTMIM----A 300

Query: 290 SRLVYAQAKDGVFPKIF-KYRSNTNAPLSAVLLMVFANFLTLFAVYFNLISFNEIIAAVN 348
           SRL +  A++G+ P +          P  A+L          F     +++   ++  + 
Sbjct: 301 SRLTFGMAREGLLPAVMGSVLPKRRTPGLAILATTLVAIALSFTSTLTILAETVVLLLLF 360

Query: 349 AFLITNIIMAAVASIKV 365
            FL  NI +  +   KV
Sbjct: 361 VFLSVNIAVLVLKRDKV 377